RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 SVEP1Q4LDE5 3571 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 GNG7O60262 68 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 NDUFB8O95169 186 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 OR2C1O95371 312 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 FABP1P07148 127 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 Q56UQ5 140 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 THYN1Q9P016 225 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 HIGD1AQ9Y241 93 aa13.27□□□□□ -0.29
PTPN20-203ENST00000374342 A0A087WWC5 75 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 LINC01548A6NM66 108 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 B4DEV8 164 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 IGHV3-23P01764 117 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 RD3LP0DJH9 198 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 MFAP4P55083 255 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 PLP1P60201 277 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 C16orf82Q7Z2V1 217 aa13.26□□□□□ -0.29
PTPN20-203ENST00000374342 COLCA2A8K830 154 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 G3V318 75 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 J3QLI3 93 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 RPL23P62829 140 aaKnown RBP13.25□□□□□ -0.29
PTPN20-203ENST00000374342 C9orf152Q5JTZ5 239 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 Q96MF0 132 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 OR51M1Q9H341 326 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 C21orf62Q9NYP8 219 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 FBXL7Q9UJT9 491 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 MDFIC2A0A1B0GVS7 189 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 TOMM40O96008 361 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 AMY1AP04745 511 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 IGHV4-31P0DP07 118 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 TUBA4BQ9H853 241 aa13.25□□□□□ -0.29
PTPN20-203ENST00000374342 GGTLC3B5MD39 225 aa13.24□□□□□ -0.29
PTPN20-203ENST00000374342 F8W735 103 aaPredicted RBP13.24□□□□□ -0.29
PTPN20-203ENST00000374342 HIST1H1BP16401 226 aaKnown RBP13.24□□□□□ -0.29
PTPN20-203ENST00000374342 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
PTPN20-203ENST00000374342 ZNF48Q96MX3 618 aaPredicted RBP13.24□□□□□ -0.29
PTPN20-203ENST00000374342 TRAV30A0A087WSZ9 112 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 A6NDX4 124 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 RNF212Q495C1 297 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 LEMD1Q68G75 181 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 FAM24BQ8N5W8 94 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 C11orf52Q96A22 123 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 FXYD5Q96DB9 178 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 A0A1W2PRE2 83 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
PTPN20-203ENST00000374342 RHOGP84095 191 aa13.23□□□□□ -0.29
PTPN20-203ENST00000374342 NAV2Q8IVL1 2488 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 IL4P05112 153 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 KRTAP1-3Q8IUG1 177 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 STXBP6Q8NFX7 210 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 TMEM68Q96MH6 324 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 PSMG3-AS1Q96PY0 264 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-203ENST00000374342 APCP25054 2843 aa13.22□□□□□ -0.29
PTPN20-203ENST00000374342 PGPEP1LA6NFU8 196 aa13.21□□□□□ -0.29
PTPN20-203ENST00000374342 GP9P14770 177 aa13.21□□□□□ -0.29
PTPN20-203ENST00000374342 SUMO1P63165 101 aaKnown RBP13.21□□□□□ -0.29
PTPN20-203ENST00000374342 C15orf32Q32M92 178 aa13.21□□□□□ -0.29
PTPN20-203ENST00000374342 ZNF343Q6P1L6 599 aa13.21□□□□□ -0.29
PTPN20-203ENST00000374342 MBD6Q96DN6 1003 aa13.21□□□□□ -0.29
PTPN20-203ENST00000374342 AURKAIP1Q9NWT8 199 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-203ENST00000374342 URGCP-MRPS24S4R325 110 aa13.21□□□□□ -0.29
PTPN20-203ENST00000374342 TRBV20OR9-2A0A075B6H5 130 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 TRAV41A0A0B4J266 112 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 SCGB2A1O75556 95 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 CRYBB3P26998 211 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.3
PTPN20-203ENST00000374342 LINC01551Q86U37 167 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 BCL6BQ8N143 479 aaPredicted RBP13.21□□□□□ -0.3
PTPN20-203ENST00000374342 BLNKQ8WV28 456 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 LINC00527Q9UJ94 153 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 PITPNC1Q9UKF7 332 aa13.21□□□□□ -0.3
PTPN20-203ENST00000374342 MT-ND4LP03901 98 aa13.2□□□□□ -0.3
PTPN20-203ENST00000374342 DEFB112Q30KQ8 113 aa13.2□□□□□ -0.3
PTPN20-203ENST00000374342 ZNF491Q8N8L2 437 aa13.2□□□□□ -0.3
PTPN20-203ENST00000374342 VN1R17PQ8TDU5 208 aa13.2□□□□□ -0.3
PTPN20-203ENST00000374342 YPEL4Q96NS1 127 aa13.2□□□□□ -0.3
PTPN20-203ENST00000374342 MS4A10Q96PG2 267 aa13.2□□□□□ -0.3
PTPN20-203ENST00000374342 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
PTPN20-203ENST00000374342 HNF1AP20823 631 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 RPL35P42766 123 aaKnown RBP13.19□□□□□ -0.3
PTPN20-203ENST00000374342 ELOVL1Q9BW60 279 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 CTDSP1Q9GZU7 261 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 TRBV9A0A0B4J1U6 114 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 WI2-2373I1.2A0A1W2PRP0 233 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 CXorf65A6NEN9 183 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 H3BRN7 92 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 CLDN34H7C241 214 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 M0QZK8 103 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 CRYBA1P05813 215 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 GPR183P32249 361 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 ZNF502Q8TBZ5 544 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 Q8WTZ3 238 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 TXN2Q99757 166 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 PRELID1Q9Y255 219 aa13.19□□□□□ -0.3
PTPN20-203ENST00000374342 H3BTX0 84 aa13.18□□□□□ -0.3
PTPN20-203ENST00000374342 IGHV4-59P01825 116 aa13.18□□□□□ -0.3
PTPN20-203ENST00000374342 RAB5AP20339 215 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms