RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PMS2P5A8MQ11 134 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 CD5P06127 495 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 RPL15P61313 204 aaKnown RBP16.11■□□□□ 0.17
LMO4-202ENST00000370544 PRDM13Q9H4Q3 707 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 PSMG4Q5JS54 123 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 Q6ZS49 121 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 NSUN5P1Q3KNT7 163 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 TRGV9Q99603 122 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 SCRT1Q9BWW7 348 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 TRGV11A0A075B6L2 103 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 GNB1LQ9BYB4 327 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 CLDN16Q9Y5I7 305 aa16.11■□□□□ 0.17
LMO4-202ENST00000370544 CD33P20138 364 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 COL8A2P25067 703 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 BRD3OSQ6XYD6 125 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 TOMM7Q9P0U1 55 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 TCF20Q9UGU0 1960 aaKnown RBP16.1■□□□□ 0.17
LMO4-202ENST00000370544 PRB4P10163 310 aaPredicted RBP16.1■□□□□ 0.17
LMO4-202ENST00000370544 C5orf64Q2M2E5 130 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 LYPD2Q6UXB3 125 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 CA1P00915 261 aaPredicted RBP16.1■□□□□ 0.17
LMO4-202ENST00000370544 MSRB2Q9Y3D2 182 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 IGKV2-40A0A087WW87 121 aaPredicted RBP16.1■□□□□ 0.17
LMO4-202ENST00000370544 TRAV1-1A0A0B4J248 108 aa16.1■□□□□ 0.17
LMO4-202ENST00000370544 IGKV2D-40P01614 121 aaPredicted RBP16.1■□□□□ 0.17
LMO4-202ENST00000370544 SRSF1Q07955 248 aaKnown RBP eCLIP16.1■□□□□ 0.17
LMO4-202ENST00000370544 LY6G6EA0A0G2JKS1 128 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 ASCL4Q6XD76 172 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 WFDC12Q8WWY7 111 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 SEPSECSQ9HD40 501 aaKnown RBP16.09■□□□□ 0.17
LMO4-202ENST00000370544 U3KQA8 63 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 IFI27P40305 119 aaPredicted RBP16.09■□□□□ 0.17
LMO4-202ENST00000370544 H3BUX3 64 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 HBDP02042 147 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 PPBPP02775 128 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 NUDT10Q8NFP7 164 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 NUDT11Q96G61 164 aa16.09■□□□□ 0.17
LMO4-202ENST00000370544 SNRNP200O75643 2136 aaKnown RBP16.08■□□□□ 0.17
LMO4-202ENST00000370544 MGAMO43451 1857 aa16.08■□□□□ 0.17
LMO4-202ENST00000370544 F2Z2F3 143 aa16.08■□□□□ 0.17
LMO4-202ENST00000370544 TMEM190Q8WZ59 177 aa16.08■□□□□ 0.17
LMO4-202ENST00000370544 A0A1B0GV90 55 aa16.08■□□□□ 0.16
LMO4-202ENST00000370544 LINC00614P0C842 121 aa16.08■□□□□ 0.16
LMO4-202ENST00000370544 EXOC3-AS1Q8N2X6 119 aa16.08■□□□□ 0.16
LMO4-202ENST00000370544 NPIPB5A8MRT5 1133 aa16.08■□□□□ 0.16
LMO4-202ENST00000370544 NXT2Q9NPJ8 142 aaKnown RBP16.08■□□□□ 0.16
LMO4-202ENST00000370544 CRIM1Q9NZV1 1036 aa16.08■□□□□ 0.16
LMO4-202ENST00000370544 VCX2Q9H322 139 aa16.08■□□□□ 0.16
LMO4-202ENST00000370544 SPSB3Q6PJ21 355 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 ATP5L2Q7Z4Y8 100 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 RPP25LQ8N5L8 163 aaKnown RBP16.07■□□□□ 0.16
LMO4-202ENST00000370544 TDGF1P13385 188 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 KLF17Q5JT82 389 aaPredicted RBP16.07■□□□□ 0.16
LMO4-202ENST00000370544 A0A1B0GW64 132 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 AGMATQ9BSE5 352 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 SIGLEC9Q9Y336 463 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 SELENOKQ9Y6D0 94 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 E7EQL1 145 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BKO60814 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BJP06899 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BOP23527 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BBP33778 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BDP58876 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 LINC00205P59089 165 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BCP62807 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST2H2BEQ16778 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BHQ93079 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BNQ99877 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 HIST1H2BMQ99879 126 aa16.07■□□□□ 0.16
LMO4-202ENST00000370544 EVI2AP22794 236 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 TMEM242Q9NWH2 141 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 GVINP1Q7Z2Y8 2422 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 ETV2O00321 342 aaPredicted RBP16.06■□□□□ 0.16
LMO4-202ENST00000370544 CFAP161Q6P656 301 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 GSN-AS1Q9NRJ2 163 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 LY6HO94772 140 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 GTSCR1Q86UQ5 136 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 TRBV7-1A0A0A6YYK4 115 aa16.06■□□□□ 0.16
LMO4-202ENST00000370544 CNTFRP26992 372 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 CYB5R2Q6BCY4 276 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 CYSLTR1Q9Y271 337 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 JKAMPQ9P055 326 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 NTF4P34130 210 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 ORMDL2Q53FV1 153 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 ZNF318Q5VUA4 2279 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 C21orf62-AS1Q17RA5 79 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 RFNGQ9Y644 331 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 K7ENP7 123 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 GZMBP10144 247 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 PRR30Q53SZ7 412 aaPredicted RBP16.05■□□□□ 0.16
LMO4-202ENST00000370544 GFI1BQ5VTD9 330 aa16.05■□□□□ 0.16
LMO4-202ENST00000370544 TMEM155Q4W5P6 130 aa16.04■□□□□ 0.16
LMO4-202ENST00000370544 TRGV4A0A0C4DH28 118 aa16.04■□□□□ 0.16
LMO4-202ENST00000370544 LOC105371267A0A1B0GV96 52 aa16.04■□□□□ 0.16
LMO4-202ENST00000370544 TCRAP04437 139 aa16.04■□□□□ 0.16
LMO4-202ENST00000370544 TSC2P49815 1807 aa16.04■□□□□ 0.16
LMO4-202ENST00000370544 BPESC1Q9GZL8 116 aa16.04■□□□□ 0.16
LMO4-202ENST00000370544 C3orf36Q3SXR2 165 aa16.04■□□□□ 0.16
LMO4-202ENST00000370544 EP300Q09472 2414 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms