RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 LYZP61626 148 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 GUCA2BQ16661 112 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 VN1R17PQ8TDU5 208 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 TECRQ9NZ01 308 aaKnown RBP13.12□□□□□ -0.31
PHGDH-202ENST00000369409 ACANP16112 2415 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 SONP18583 2426 aaKnown RBP13.12□□□□□ -0.31
PHGDH-202ENST00000369409 AP4M1O00189 453 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 PAGE4O60829 102 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 FABP1P07148 127 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 UBE2G2P60604 165 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 SMUG1Q53HV7 270 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 CYB561D1Q8N8Q1 229 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 NECAP1Q8NC96 275 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
PHGDH-202ENST00000369409 TRAV30A0A087WSZ9 112 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 ELOA3CA0A087WX78 387 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-202ENST00000369409 OR2T8A6NH00 312 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 OR7C2O60412 319 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 SCO1O75880 301 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 RD3LP0DJH9 198 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 C8orf88P0DMB2 117 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 SRP14P37108 136 aaKnown RBP13.11□□□□□ -0.31
PHGDH-202ENST00000369409 TAS2R45P59539 299 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 MEF2BQ02080 365 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-202ENST00000369409 TMEM95Q3KNT9 176 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 LINC00305Q7Z4B0 112 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 SIGLECL1Q8N7X8 197 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 SUN5Q8TC36 379 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 YAE1D1Q9NRH1 226 aa13.11□□□□□ -0.31
PHGDH-202ENST00000369409 TRAV5A0A0B4J249 113 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 HYPMO75409 117 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 TOMM40O96008 361 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 PLP1P60201 277 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 ZNF503Q96F45 646 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 SLC25A2Q9BXI2 301 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 TAGLN2P37802 199 aaKnown RBP13.1□□□□□ -0.31
PHGDH-202ENST00000369409 CD81P60033 236 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 PQLC2Q6ZP29 291 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 OR5AU1Q8NGC0 362 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 OR51G1Q8NGK1 321 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 FAM167A-AS1Q96KT0 104 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 PRELID1Q9Y255 219 aa13.1□□□□□ -0.31
PHGDH-202ENST00000369409 TRGV3P03979 118 aa13.09□□□□□ -0.31
PHGDH-202ENST00000369409 PPIFP30405 207 aaKnown RBP13.09□□□□□ -0.31
PHGDH-202ENST00000369409 FCGR2BP31994 310 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-202ENST00000369409 GPR183P32249 361 aa13.09□□□□□ -0.31
PHGDH-202ENST00000369409 KIAA0141Q14154 515 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-202ENST00000369409 SVBPQ8N300 66 aa13.09□□□□□ -0.31
PHGDH-202ENST00000369409 DUX5Q96PT3 197 aa13.09□□□□□ -0.31
PHGDH-202ENST00000369409 TXN2Q99757 166 aa13.09□□□□□ -0.31
PHGDH-202ENST00000369409 HIGD1AQ9Y241 93 aa13.09□□□□□ -0.31
PHGDH-202ENST00000369409 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 OR10J4P0C629 311 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 ATP5G3P48201 142 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 YPEL3P61236 119 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-202ENST00000369409 SOHLH1Q5JUK2 328 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 CST9LP1Q5W188 147 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 OR4F5Q8NH21 305 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 EEF1AKMT3Q96AZ1 226 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 CCDC140Q96MF4 163 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 OR4F4Q96R69 305 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 CHRDL1Q9BU40 450 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 C11orf94C9JXX5 98 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 IL4P05112 153 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 CTSGP08311 255 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 TPPP2P59282 170 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 TMEM167BQ9NRX6 74 aa13.08□□□□□ -0.32
PHGDH-202ENST00000369409 ADMP35318 185 aa13.07□□□□□ -0.32
PHGDH-202ENST00000369409 UBE2L3P68036 154 aaKnown RBP13.07□□□□□ -0.32
PHGDH-202ENST00000369409 ATP5G2Q06055 141 aa13.07□□□□□ -0.32
PHGDH-202ENST00000369409 ZNF491Q8N8L2 437 aa13.07□□□□□ -0.32
PHGDH-202ENST00000369409 YTHDF2Q9Y5A9 579 aaKnown RBP13.07□□□□□ -0.32
PHGDH-202ENST00000369409 NUPL2O15504 423 aaKnown RBP13.06□□□□□ -0.32
PHGDH-202ENST00000369409 PYYP10082 97 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 CFHR3Q02985 330 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 FAM90A2PQ658T7 463 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 CLEC19AQ6UXS0 136 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 Q8WTZ3 238 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 ZNF580Q9UK33 172 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 TRBV7-1A0A0A6YYK4 115 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 WI2-2373I1.2A0A1W2PRP0 233 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 FAM74A7A6NL05 159 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 H3BUA1 57 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 PF4V1P10720 104 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 HNF1AP20823 631 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 LEMD1Q68G75 181 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 PAXXQ9BUH6 204 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 PRSS22Q9GZN4 317 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 NPFFR1Q9GZQ6 430 aa13.06□□□□□ -0.32
PHGDH-202ENST00000369409 NOTCH2Q04721 2471 aa13.05□□□□□ -0.32
PHGDH-202ENST00000369409 ANK3Q12955 4377 aaKnown RBP13.05□□□□□ -0.32
PHGDH-202ENST00000369409 OR2C1O95371 312 aa13.05□□□□□ -0.32
PHGDH-202ENST00000369409 CLEC3BP05452 202 aa13.05□□□□□ -0.32
PHGDH-202ENST00000369409 USF2Q15853 346 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-202ENST00000369409 SLC25A39Q9BZJ4 359 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms