RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 UTF1Q5T230 341 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 SAMD5Q5TGI4 173 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 FA2HQ7L5A8 372 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-203ENST00000369259 CT45A3Q8NHU0 189 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 SH3BGRL2Q9UJC5 107 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 TRIOO75962 3097 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 AGFG2O95081 481 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 FSTL3O95633 263 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 LTAP01374 205 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 SSBP2P81877 361 aaPredicted RBP13.06□□□□□ -0.32
CHD1L-203ENST00000369259 C3AR1Q16581 482 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 TMEM116Q8NCL8 245 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 ABHD17AQ96GS6 310 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 FMC1Q96HJ9 113 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 Q5PR19 223 aa13.06□□□□□ -0.32
CHD1L-203ENST00000369259 M0R296 226 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 DLL1O00548 723 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 FTH1P19P0C7X4 201 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 MAGEA5P43359 124 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
CHD1L-203ENST00000369259 ZADH2Q8N4Q0 377 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 BLNKQ8WV28 456 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 NPIPB6E9PJ23 425 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 LGALS9BQ3B8N2 356 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 LGALS9CQ6DKI2 356 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 TMEM108Q6UXF1 575 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 OR2Z1Q8NG97 314 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 OR8A1Q8NGG7 326 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 FAM222BQ8WU58 562 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
CHD1L-203ENST00000369259 GAGE12HA6NDE8 117 aa13.04□□□□□ -0.32
CHD1L-203ENST00000369259 SMIM13P0DJ93 91 aa13.04□□□□□ -0.32
CHD1L-203ENST00000369259 OR10W1Q8NGF6 305 aa13.04□□□□□ -0.32
CHD1L-203ENST00000369259 OR5AN1Q8NGI8 311 aa13.04□□□□□ -0.32
CHD1L-203ENST00000369259 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
CHD1L-203ENST00000369259 IGKV1D-17A0A075B6S4 117 aa13.03□□□□□ -0.32
CHD1L-203ENST00000369259 PLAUP00749 431 aa13.03□□□□□ -0.32
CHD1L-203ENST00000369259 ACP1P24666 158 aa13.03□□□□□ -0.32
CHD1L-203ENST00000369259 LINC00305Q7Z4B0 112 aa13.03□□□□□ -0.32
CHD1L-203ENST00000369259 RPRMLQ8N4K4 120 aa13.03□□□□□ -0.32
CHD1L-203ENST00000369259 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
CHD1L-203ENST00000369259 TCRBV4S1A1TA0A5B7 111 aa13.03□□□□□ -0.32
CHD1L-203ENST00000369259 TSSC4Q9Y5U2 329 aaPredicted RBP13.03□□□□□ -0.32
CHD1L-203ENST00000369259 TIMM8AO60220 97 aaPredicted RBP13.02□□□□□ -0.32
CHD1L-203ENST00000369259 COL8A1P27658 744 aa13.02□□□□□ -0.32
CHD1L-203ENST00000369259 TCTAP57738 103 aa13.02□□□□□ -0.32
CHD1L-203ENST00000369259 HES7Q9BYE0 225 aa13.02□□□□□ -0.32
CHD1L-203ENST00000369259 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
CHD1L-203ENST00000369259 TTTY12Q9BZ98 90 aa13.02□□□□□ -0.33
CHD1L-203ENST00000369259 A0A096LNJ9 63 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 A0A1B0GUT8 65 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 ERHP84090 104 aaKnown RBP13.01□□□□□ -0.33
CHD1L-203ENST00000369259 RBMXL3Q8N7X1 1067 aaKnown RBP13.01□□□□□ -0.33
CHD1L-203ENST00000369259 SAP25Q8TEE9 199 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 NPIPB3Q92617 1050 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 OVOL3O00110 214 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 IGKV1-16P04430 117 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 TCRAP04437 139 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
CHD1L-203ENST00000369259 CACNG7P62955 275 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 SCGB2A2Q13296 93 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 C17orf58Q2M2W7 97 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 DHRS13Q6UX07 377 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 SLC25A48Q6ZT89 311 aaKnown RBP13.01□□□□□ -0.33
CHD1L-203ENST00000369259 WFDC12Q8WWY7 111 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 VGLL1Q99990 258 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 TNCP24821 2201 aa13.01□□□□□ -0.33
CHD1L-203ENST00000369259 IGKV1D-37A0A075B6S9 117 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 J3QR89 54 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 ZNF207O43670 478 aaKnown RBP13□□□□□ -0.33
CHD1L-203ENST00000369259 FAM106CPP0CH98 169 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 CGB3P0DN86 165 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 CGB7P0DN87 165 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 RIGQ13278 110 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 FAM106AQ4KMX7 169 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 HES3Q5TGS1 186 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 PCP2Q8IVA1 136 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 ZNRF1Q8ND25 227 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 SAA1P0DJI8 122 aaPredicted RBP13□□□□□ -0.33
CHD1L-203ENST00000369259 RAB9AP51151 201 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 ABHD17BQ5VST6 288 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 FOXI2Q6ZQN5 318 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 GATD1Q8NB37 220 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 SPATA25Q9BR10 227 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 NDUFA4L2Q9NRX3 87 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 FZR1Q9UM11 496 aa13□□□□□ -0.33
CHD1L-203ENST00000369259 ARMS2P0C7Q2 107 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 IFI27P40305 119 aaPredicted RBP12.99□□□□□ -0.33
CHD1L-203ENST00000369259 NMUP48645 174 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 LOXL1Q08397 574 aaPredicted RBP12.99□□□□□ -0.33
CHD1L-203ENST00000369259 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 ZNF788Q6ZQV5 615 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 PLSCR4Q9NRQ2 329 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 PI4KAP42356 2102 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms