RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 NTF4P34130 210 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 MNX1P50219 401 aaPredicted RBP8.62□□□□□ -1.03
PRDM1-201ENST00000369089 EGR4Q05215 589 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 IDI2-AS1Q9NZ38 188 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 PLAUP00749 431 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 NPYP01303 97 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 PLNP26678 52 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 PAPPA-AS1Q5QFB9 102 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 FOXB1Q99853 325 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 ASCL2Q99929 193 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 TDRD6O60522 2096 aaKnown RBP8.61□□□□□ -1.03
PRDM1-201ENST00000369089 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
PRDM1-201ENST00000369089 IGKV1-8A0A0C4DH67 115 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 DNAL4O96015 105 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 IGKV1D-33P01593 117 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 IGKV1-33P01594 117 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 IGHMP01871 453 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 IFI6P09912 130 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 FXYD2P54710 66 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 WIPF2Q8TF74 440 aaPredicted RBP8.61□□□□□ -1.03
PRDM1-201ENST00000369089 DYNLRB1Q9NP97 96 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 PAX9P55771 341 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 C16orf47Q6ZP98 133 aaPredicted RBP8.61□□□□□ -1.03
PRDM1-201ENST00000369089 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 CXCL13O43927 109 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 ANKRD29Q8N6D5 301 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 NPIPB3Q92617 1050 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 SCARF2Q96GP6 870 aaPredicted RBP8.61□□□□□ -1.03
PRDM1-201ENST00000369089 CYYR1Q96J86 154 aa8.61□□□□□ -1.03
PRDM1-201ENST00000369089 IGHV3-64DA0A0J9YX35 117 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 IL11RAQ14626 422 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 OR13A1Q8NGR1 328 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 ZNF747Q9BV97 191 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 MPC1Q9Y5U8 109 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 NCOR1O75376 2440 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 DLL1O00548 723 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 RBP4P02753 201 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 GOLT1AQ6ZVE7 132 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 IGKV1-9A0A0C4DH69 117 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 NPIPB11E5RHQ5 1161 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 CDX4O14627 284 aaPredicted RBP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 CSRP1P21291 193 aaKnown RBP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 SRSF1Q07955 248 aaKnown RBP eCLIP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 FHL5Q5TD97 284 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 SPANXN1Q5VSR9 72 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 PCSK4Q6UW60 755 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 LINC00479Q96M42 142 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 HIGD1BQ9P298 99 aa8.6□□□□□ -1.03
PRDM1-201ENST00000369089 RIF1Q5UIP0 2472 aaKnown RBP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 TIMM8AO60220 97 aaPredicted RBP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 KLF13Q9Y2Y9 288 aaPredicted RBP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 PDCD11Q14690 1871 aaKnown RBP8.6□□□□□ -1.03
PRDM1-201ENST00000369089 C2orf70A6NJV1 201 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 HRKO00198 91 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 C1orf210Q8IVY1 113 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 WDR31Q8NA23 367 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 FAM214BQ7L5A3 538 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 MDP1Q86V88 176 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 FAM57AQ8TBR7 257 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 GTSF1Q8WW33 167 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 FSCN3Q9NQT6 498 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 D6R8Y8 96 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 UQCRQO14949 82 aa8.59□□□□□ -1.03
PRDM1-201ENST00000369089 LGALS1P09382 135 aaKnown RBP8.59□□□□□ -1.03
PRDM1-201ENST00000369089 IFI27P40305 119 aaPredicted RBP8.59□□□□□ -1.03
PRDM1-201ENST00000369089 IGHV3-15A0A0B4J1V0 119 aa8.59□□□□□ -1.04
PRDM1-201ENST00000369089 C11orf52Q96A22 123 aa8.59□□□□□ -1.04
PRDM1-201ENST00000369089 MRPL20Q9BYC9 149 aaKnown RBP8.59□□□□□ -1.04
PRDM1-201ENST00000369089 TANC1Q9C0D5 1861 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 FOXS1O43638 330 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 XGP55808 180 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 HERVK_113P63121 156 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 RALGAPA2Q2PPJ7 1873 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 CENPVL3A0A0U1RRI6 287 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 J3QT63 122 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 VMA21Q3ZAQ7 101 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 SLC22A18ASQ8N1D0 253 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 C8orf46Q8TAG6 207 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 NRGNQ92686 78 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 DUX3Q96PT4 197 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 ABCA7Q8IZY2 2146 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 LINC00173Q6ZV60 143 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 VKORC1L1Q8N0U8 176 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 DEFB127Q9H1M4 99 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 ZNF581Q9P0T4 197 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 SCN2AQ99250 2005 aa8.58□□□□□ -1.04
PRDM1-201ENST00000369089 K7ESF4 209 aa8.57□□□□□ -1.04
PRDM1-201ENST00000369089 ATOX1O00244 68 aa8.57□□□□□ -1.04
PRDM1-201ENST00000369089 SLC25A47Q6Q0C1 308 aa8.57□□□□□ -1.04
PRDM1-201ENST00000369089 FAM231DQ6ZW35 169 aa8.57□□□□□ -1.04
PRDM1-201ENST00000369089 PPDPFQ9H3Y8 114 aa8.57□□□□□ -1.04
PRDM1-201ENST00000369089 NPIPB13A6NJU9 1138 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms