RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
SEMA6C-202ENST00000368912 OSR2Q8N2R0 312 aa12.65□□□□□ -0.38
SEMA6C-202ENST00000368912 ABHD14BQ96IU4 210 aa12.65□□□□□ -0.38
SEMA6C-202ENST00000368912 MAP1LC3CQ9BXW4 147 aa12.65□□□□□ -0.38
SEMA6C-202ENST00000368912 HLA-DRB1P01911 266 aa12.65□□□□□ -0.39
SEMA6C-202ENST00000368912 FCGR2BP31994 310 aaPredicted RBP12.65□□□□□ -0.39
SEMA6C-202ENST00000368912 EDDM3BP56851 147 aa12.65□□□□□ -0.39
SEMA6C-202ENST00000368912 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.39
SEMA6C-202ENST00000368912 RAB1CQ92928 201 aa12.65□□□□□ -0.39
SEMA6C-202ENST00000368912 GPR82Q96P67 336 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 RNASE7Q9H1E1 156 aaKnown RBP12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 SAP30LQ9HAJ7 183 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 C2orf70A6NJV1 201 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 INSL3P51460 131 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 RAB1BQ9H0U4 201 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 GCM1Q9NP62 436 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 SCRT2Q9NQ03 307 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 SMIM13P0DJ93 91 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 GNG3P63215 75 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 VWC2Q2TAL6 325 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 KCNIP2Q9NS61 270 aa12.64□□□□□ -0.39
SEMA6C-202ENST00000368912 FLNCQ14315 2725 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 IGKV1-12A0A0C4DH73 117 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 IGKV1D-12P01611 117 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 GPR12P47775 334 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 MFAP2P55001 183 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 FOXA3P55318 350 aaPredicted RBP12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 OR8B8Q15620 311 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 CCL17Q92583 94 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 IGHV1-18A0A0C4DH31 117 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 WDR31Q8NA23 367 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 PKIBQ9C010 78 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 RPL31P62899 125 aaKnown RBP12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 FOXE3Q13461 319 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 MOGAT3Q86VF5 341 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 CCL28Q9NRJ3 127 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 TNFRSF19Q9NS68 423 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 RABAC1Q9UI14 185 aa12.63□□□□□ -0.39
SEMA6C-202ENST00000368912 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 VDAC2P45880 294 aaPredicted RBP12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 TEX29Q8N6K0 151 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 VGLL1Q99990 258 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 DOPEY2Q9Y3R5 2298 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 LRBAP50851 2863 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 USP24Q9UPU5 2620 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 A1L4Q6 167 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 RTL8AQ9BWD3 113 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 USP9XQ93008 2570 aaPredicted RBP12.62□□□□□ -0.39
SEMA6C-202ENST00000368912 IGSF10Q6WRI0 2623 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 F2RP25116 425 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 GCSAMLQ5JQS6 135 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 VCX2Q9H322 139 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 GNLYP22749 145 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 SSBP3Q9BWW4 388 aaPredicted RBP12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 TRBV20-1A0A075B6N2 111 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 A0A0G2JRQ6 117 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 A4D1N5 150 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 H0Y980 276 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 CX3CL1P78423 397 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 BSPH1Q075Z2 132 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 RTL8BQ17RB0 113 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 NMSQ5H8A3 153 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 FAM234AQ9H0X4 552 aa12.61□□□□□ -0.39
SEMA6C-202ENST00000368912 APOMO95445 188 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 CLDN14O95500 239 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 TFF3Q07654 80 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 TIGITQ495A1 244 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 ZNF818PQ6ZRF7 136 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 DECR2Q9NUI1 292 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 ZNF391Q9UJN7 358 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 TRGV10A0A0A0MS01 117 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 DEFB108AA8MXU0 73 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 H3BMG7 143 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 LY6HO94772 140 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 PRB3Q04118 309 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 LSM4Q9Y4Z0 139 aaKnown RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 COL27A1Q8IZC6 1860 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 MBD3L4A6NDZ8 208 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 MBD3L3A6NE82 208 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 MBD3L5A6NJ08 208 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 LYNX1G3V0Z9 82 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 LYNX1P0DP58 116 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 GUSBP1Q15486 140 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 AMTNQ6UX39 209 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 MBD3L2Q8NHZ7 208 aaPredicted RBP12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 CFAP46Q8IYW2 2715 aa12.6□□□□□ -0.39
SEMA6C-202ENST00000368912 IGHV3-43A0A0B4J1X8 118 aa12.59□□□□□ -0.39
SEMA6C-202ENST00000368912 CSN3P07498 182 aa12.59□□□□□ -0.39
SEMA6C-202ENST00000368912 IGHV3-43DP0DP04 118 aa12.59□□□□□ -0.39
SEMA6C-202ENST00000368912 COX8AP10176 69 aa12.59□□□□□ -0.39
SEMA6C-202ENST00000368912 TMEM189A5PLL7 270 aa12.59□□□□□ -0.39
SEMA6C-202ENST00000368912 GAGE12JA6NER3 117 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms