RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SIVA1O15304 175 aa9.96□□□□□ -0.82
VAMP4-202ENST00000367740 GSTZ1O43708 216 aaPredicted RBP9.96□□□□□ -0.82
VAMP4-202ENST00000367740 INSP01308 110 aa9.96□□□□□ -0.82
VAMP4-202ENST00000367740 RAB3BP20337 219 aa9.96□□□□□ -0.82
VAMP4-202ENST00000367740 ID1P41134 155 aa9.96□□□□□ -0.82
VAMP4-202ENST00000367740 RPL5P46777 297 aaKnown RBP9.96□□□□□ -0.82
VAMP4-202ENST00000367740 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.82
VAMP4-202ENST00000367740 DHRSXQ8N5I4 330 aa9.96□□□□□ -0.82
VAMP4-202ENST00000367740 OR1S2Q8NGQ3 325 aa9.96□□□□□ -0.82
VAMP4-202ENST00000367740 ACOT13Q9NPJ3 140 aa9.96□□□□□ -0.82
VAMP4-202ENST00000367740 PTGES3LE9PB15 166 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 M0R2Z0 102 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 SCGNO76038 276 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 ELK1P19419 428 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 HOXA5P20719 270 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 SPINK13Q1W4C9 94 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 IZUMO4Q1ZYL8 232 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 NFE4Q86UQ8 179 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 SLC35G3Q8N808 338 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 OR5AP2Q8NGF4 316 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 OR6F1Q8NGZ6 308 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 MRGPRFQ96AM1 343 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 FXYD6Q9H0Q3 95 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 S100A14Q9HCY8 104 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 DOK5Q9P104 306 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 KLK11Q9UBX7 282 aa9.95□□□□□ -0.82
VAMP4-202ENST00000367740 SMIM30A4D0T7 59 aa9.94□□□□□ -0.82
VAMP4-202ENST00000367740 H3BNG1 76 aa9.94□□□□□ -0.82
VAMP4-202ENST00000367740 ATP5HO75947 161 aa9.94□□□□□ -0.82
VAMP4-202ENST00000367740 OR10J1P30954 320 aa9.94□□□□□ -0.82
VAMP4-202ENST00000367740 SUB1P53999 127 aaKnown RBP eCLIP9.94□□□□□ -0.82
VAMP4-202ENST00000367740 MLLT11Q13015 90 aaPredicted RBP9.94□□□□□ -0.82
VAMP4-202ENST00000367740 BAP18Q8IXM2 172 aa9.94□□□□□ -0.82
VAMP4-202ENST00000367740 CMTM1Q8IZ96 169 aa9.94□□□□□ -0.82
VAMP4-202ENST00000367740 IGLV5-52A0A0A0MRZ9 124 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 MYL9P24844 172 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 RND2P52198 227 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 B2MP61769 119 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 BSXQ3C1V8 233 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 PRSS54Q6PEW0 395 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 C20orf173Q96LM9 149 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 FAM212BQ9NTI7 297 aaPredicted RBP9.93□□□□□ -0.82
VAMP4-202ENST00000367740 EHFQ9NZC4 300 aa9.93□□□□□ -0.82
VAMP4-202ENST00000367740 TIMM8BQ9Y5J9 83 aaPredicted RBP9.93□□□□□ -0.82
VAMP4-202ENST00000367740 GPR31O00270 319 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 ISLRO14498 428 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 HSPA13P48723 471 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 DHRS11Q6UWP2 260 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 OR11H7Q8NGC8 314 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
VAMP4-202ENST00000367740 KRTAP9-9Q9BYP9 154 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 KRTAP9-4Q9BYQ2 154 aa9.92□□□□□ -0.82
VAMP4-202ENST00000367740 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
VAMP4-202ENST00000367740 A0A096LPF7 62 aa9.91□□□□□ -0.82
VAMP4-202ENST00000367740 TOMM40O96008 361 aa9.91□□□□□ -0.82
VAMP4-202ENST00000367740 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
VAMP4-202ENST00000367740 PHLDA2Q53GA4 152 aa9.91□□□□□ -0.82
VAMP4-202ENST00000367740 LINC00612Q8N6U2 182 aa9.91□□□□□ -0.82
VAMP4-202ENST00000367740 OR51G1Q8NGK1 321 aa9.91□□□□□ -0.82
VAMP4-202ENST00000367740 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
VAMP4-202ENST00000367740 RPRMQ9NS64 109 aa9.91□□□□□ -0.82
VAMP4-202ENST00000367740 TRAV12-2A0A075B6T6 113 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 TRAV18A0A075B6X5 111 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 A0A0B4J293 547 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 MEIS3P1A6NDR6 274 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 NXPH3O95157 252 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 NXPH4O95158 308 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 RFX2P48378 723 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 MGLLQ99685 303 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 RHBDL2Q9NX52 303 aa9.9□□□□□ -0.82
VAMP4-202ENST00000367740 IGKV1-5P01602 117 aa9.89□□□□□ -0.83
VAMP4-202ENST00000367740 RD3LP0DJH9 198 aa9.89□□□□□ -0.83
VAMP4-202ENST00000367740 PSG1P11464 419 aa9.89□□□□□ -0.83
VAMP4-202ENST00000367740 PSMB9P28065 219 aa9.89□□□□□ -0.83
VAMP4-202ENST00000367740 NUP62P37198 522 aaPredicted RBP9.89□□□□□ -0.83
VAMP4-202ENST00000367740 ETV6P41212 452 aa9.89□□□□□ -0.83
VAMP4-202ENST00000367740 CNN1P51911 297 aaKnown RBP9.89□□□□□ -0.83
VAMP4-202ENST00000367740 TBC1D26Q86UD7 250 aa9.89□□□□□ -0.83
VAMP4-202ENST00000367740 RNASE8Q8TDE3 154 aaKnown RBP9.89□□□□□ -0.83
VAMP4-202ENST00000367740 NTN5Q8WTR8 489 aaPredicted RBP9.89□□□□□ -0.83
VAMP4-202ENST00000367740 TNXBP22105 4242 aa9.88□□□□□ -0.83
VAMP4-202ENST00000367740 SLC25A4P12235 298 aa9.88□□□□□ -0.83
VAMP4-202ENST00000367740 TAS2R60P59551 318 aa9.88□□□□□ -0.83
VAMP4-202ENST00000367740 PACRGLQ8N7B6 248 aa9.88□□□□□ -0.83
VAMP4-202ENST00000367740 SLC25A38Q96DW6 304 aa9.88□□□□□ -0.83
VAMP4-202ENST00000367740 VSIG2Q96IQ7 327 aa9.88□□□□□ -0.83
VAMP4-202ENST00000367740 LINC01587Q99440 93 aa9.88□□□□□ -0.83
VAMP4-202ENST00000367740 NOTOA8MTQ0 251 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 C1QBP02746 253 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 HTN1P15515 57 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
VAMP4-202ENST00000367740 TBCEQ15813 527 aaPredicted RBP9.87□□□□□ -0.83
VAMP4-202ENST00000367740 C22orf42Q6IC83 251 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 OR8G2PQ6IF36 304 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 Q6ZSA8 131 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 TMEM144Q7Z5S9 345 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 GPR141Q7Z602 305 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 C10orf67Q8IYJ2 551 aa9.87□□□□□ -0.83
VAMP4-202ENST00000367740 TMEM256Q8N2U0 113 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms