RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ZNF257Q9Y2Q1 563 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 SLC25A15Q9Y619 301 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 ADGRG4Q8IZF6 3080 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 A8MWL6 223 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 NBEAP1P0C6P0 100 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 FAM87AP0C7U9 286 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 GLRXP35754 106 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 WT1-ASQ06250 92 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 UBE2V1Q13404 147 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 LOXL4Q96JB6 756 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 FAM167A-AS1Q96KT0 104 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 ZNF714Q96N38 554 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 GAFA1Q96PS6 74 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 GAL3ST2Q9H3Q3 398 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 MRPL27Q9P0M9 148 aaKnown RBP6.63□□□□□ -1.35
CD46-208ENST00000367042 EPDR1Q9UM22 224 aa6.63□□□□□ -1.35
CD46-208ENST00000367042 SERTM2A0A1B0GWG4 89 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 IGHV1-46P01743 117 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 RBP4P02753 201 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 CEACAM8P31997 349 aaPredicted RBP6.62□□□□□ -1.35
CD46-208ENST00000367042 PERPQ96FX8 193 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 TMEM191AQ9H0A3 160 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 MRPL36Q9P0J6 103 aaKnown RBP6.62□□□□□ -1.35
CD46-208ENST00000367042 TMSB15BA0A087X1C1 80 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 TCRBV4S1A1TA0A5B7 111 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 IGLV1-44P01699 117 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 S100A7P31151 101 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 SLC25A34Q6PIV7 304 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 SLC25A48Q6ZT89 311 aaKnown RBP6.62□□□□□ -1.35
CD46-208ENST00000367042 OR4C13Q8NGP0 309 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 OSR1Q8TAX0 266 aaPredicted RBP6.62□□□□□ -1.35
CD46-208ENST00000367042 ORAOV1Q8WV07 137 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 GPR82Q96P67 336 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 MAP1LC3CQ9BXW4 147 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 RPP21Q9H633 154 aaKnown RBP6.62□□□□□ -1.35
CD46-208ENST00000367042 PLSCR4Q9NRQ2 329 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 TPSG1Q9NRR2 321 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 ZGRF1Q86YA3 2104 aa6.62□□□□□ -1.35
CD46-208ENST00000367042 SPTBN1Q01082 2364 aaKnown RBP6.62□□□□□ -1.35
CD46-208ENST00000367042 MUC21A0A0G2JKD1 596 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 MUC21A0A140T8X8 626 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 LOC389332A0A1B0GUA5 103 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 UQCRFS1P47985 274 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 VMA21Q3ZAQ7 101 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 MUC21Q5SSG8 566 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 PATE2Q6UY27 113 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 GOLT1AQ6ZVE7 132 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 CIARTQ8N365 385 aaPredicted RBP6.61□□□□□ -1.35
CD46-208ENST00000367042 CACNG8Q8WXS5 425 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 IGHV2-26A0A0B4J1V2 119 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 LDLRAD2Q5SZI1 272 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 VSTM2AQ8TAG5 236 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 AP1S3Q96PC3 154 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 PTPRBP23467 1997 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 A0A087X0K7 114 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 H0YJW9 148 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 ZNF474Q6S9Z5 364 aaPredicted RBP6.61□□□□□ -1.35
CD46-208ENST00000367042 SPATA12Q7Z6I5 190 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 EXOC3-AS1Q8N2X6 119 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 OR8A1Q8NGG7 326 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 PRSS3P2Q8NHM4 247 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 FXYD5Q96DB9 178 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 ZC2HC1AQ96GY0 325 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 Q9H3A6 140 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 NDUFA4L2Q9NRX3 87 aa6.61□□□□□ -1.35
CD46-208ENST00000367042 MRPS16Q9Y3D3 137 aaKnown RBP6.61□□□□□ -1.35
CD46-208ENST00000367042 MALRD1Q5VYJ5 2156 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 IGHV1-24A0A0C4DH33 117 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 SPAARA0A1B0GVQ0 90 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 OR2T8A6NH00 312 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 FNDC10F2Z333 226 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 SYS1-DBNDD2H3BUS1 97 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 CDX4O14627 284 aaPredicted RBP6.6□□□□□ -1.35
CD46-208ENST00000367042 IGHG3P01860 377 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 WT1P19544 449 aaPredicted RBP6.6□□□□□ -1.35
CD46-208ENST00000367042 LINC00322Q6ZN03 302 aaPredicted RBP6.6□□□□□ -1.35
CD46-208ENST00000367042 SRSF12Q8WXF0 261 aaKnown RBP6.6□□□□□ -1.35
CD46-208ENST00000367042 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.6□□□□□ -1.35
CD46-208ENST00000367042 IGHV1-69-2A0A0G2JMI3 117 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 VWC2LB2RUY7 222 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 NDUFB3O43676 98 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 TNFRSF1AP19438 455 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 COTL1Q14019 142 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 TIMM23BQ5SRD1 257 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 S4R3C0 116 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
CD46-208ENST00000367042 A0A1W2PPI3 338 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 C2orf70A6NJV1 201 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 CGB3P0DN86 165 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 CGB7P0DN87 165 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 FXYD7P58549 80 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 FAM162BQ5T6X4 162 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 AMMECR1LQ6DCA0 310 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 ZNF788Q6ZQV5 615 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 FA2HQ7L5A8 372 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 ZADH2Q8N4Q0 377 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 DEFB124Q8NES8 71 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 FAM222BQ8WU58 562 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 DYNLRB1Q9NP97 96 aa6.6□□□□□ -1.35
CD46-208ENST00000367042 IGLC7A0M8Q6 106 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms