RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 NUP155O75694 1391 aa-0.35□□□□□ -2.47
RNU6-553P-201ENST00000364047 ASCC3Q8N3C0 2202 aaKnown RBP-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 TNXBP22105 4242 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 SONP18583 2426 aaKnown RBP-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 A0A087X0T9 212 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 SMIM9A6NGZ8 99 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 TNNC2P02585 160 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 SMIM10L2AP0DMW4 78 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 SMIM10L2BP0DMW5 78 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 SPINT3P49223 89 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 FOXA3P55318 350 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 SPCS3P61009 180 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 OR2T35Q8NGX2 323 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 OR2T10Q8NGZ9 312 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 GPER1Q99527 375 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 HIST1H2BLQ99880 126 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 C20orf27Q9GZN8 174 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 CYSLTR1Q9Y271 337 aa-0.36□□□□□ -2.47
RNU6-553P-201ENST00000364047 CASP8AP2Q9UKL3 1982 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 HERC2O95714 4834 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 GADD45GO95257 159 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 CD79AP11912 226 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 CASP1P29466 404 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 ANP32AP39687 249 aaKnown RBP-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 HIST3H3Q16695 136 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 C12orf74Q32Q52 190 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 CDKL4Q5MAI5 379 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 C2orf82Q6UX34 121 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 OR10AC1Q8NH08 325 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 CITO14578 2027 aa-0.37□□□□□ -2.47
RNU6-553P-201ENST00000364047 DOPEY1Q5JWR5 2465 aa-0.38□□□□□ -2.47
RNU6-553P-201ENST00000364047 STAB2Q8WWQ8 2551 aa-0.38□□□□□ -2.47
RNU6-553P-201ENST00000364047 PIRO00625 290 aa-0.38□□□□□ -2.47
RNU6-553P-201ENST00000364047 Q8IYB0 196 aa-0.38□□□□□ -2.47
RNU6-553P-201ENST00000364047 WFDC5Q8TCV5 224 aa-0.38□□□□□ -2.47
RNU6-553P-201ENST00000364047 TP53RKQ96S44 253 aa-0.38□□□□□ -2.47
RNU6-553P-201ENST00000364047 WRNQ14191 1432 aaPredicted RBP eCLIP-0.38□□□□□ -2.47
RNU6-553P-201ENST00000364047 HERC1Q15751 4861 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 OR4C46A6NHA9 309 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 TGOLN2O43493 480 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 KRT222Q8N1A0 295 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 GDPD1Q8N9F7 314 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 SLAMF6Q96DU3 332 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 CCDC90BQ9GZT6 254 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 TNS3Q68CZ2 1445 aa-0.39□□□□□ -2.47
RNU6-553P-201ENST00000364047 MED1Q15648 1581 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 BSNQ9UPA5 3926 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 TRAV26-2A0A0B4J265 109 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 NUPR2A6NF83 97 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 C1orf196B1AJZ1 125 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 F8W1H4 67 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 H3BRM9 83 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 CALB1P05937 261 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 CD2P06729 351 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 RBP1P09455 135 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 RHOBP62745 196 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 OR52L1Q8NGH7 329 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 PTH2Q96A98 100 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 ADAT3Q96EY9 351 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 MRPL27Q9P0M9 148 aaKnown RBP-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 KIAA1549Q9HCM3 1950 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 NBEAL2Q6ZNJ1 2754 aa-0.4□□□□□ -2.47
RNU6-553P-201ENST00000364047 TAF1LQ8IZX4 1826 aa-0.41□□□□□ -2.47
RNU6-553P-201ENST00000364047 C5orf67F2Z3F1 127 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 FXYD6P3P58550 94 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 DYNLT1P63172 113 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 OR2F1Q13607 317 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 ACOT6Q3I5F7 207 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 C8orf74Q6P047 294 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 TEN1Q86WV5 123 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 SLC30A7Q8NEW0 376 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 MRPS26Q9BYN8 205 aaKnown RBP-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 TMEM138Q9NPI0 162 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 MUC4Q99102 2169 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 KDM6AO15550 1401 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 FAT3Q8TDW7 4589 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 BDP1A6H8Y1 2624 aa-0.41□□□□□ -2.48
RNU6-553P-201ENST00000364047 TRBV30A0A0K0K1B3 111 aa-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 HIST1H1EP10412 219 aaKnown RBP-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 ZNF833PQ6ZTB9 187 aa-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 LYSMD1Q96S90 227 aa-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 PRADC1Q9BSG0 188 aa-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 IDI2-AS1Q9NZ38 188 aa-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 SBF1O95248 1867 aa-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 NEO1Q92859 1461 aa-0.42□□□□□ -2.48
RNU6-553P-201ENST00000364047 CHD8Q9HCK8 2581 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 TRAV10A0A0B4J240 114 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 M0QX08 132 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 GLIPR1L1Q6UWM5 242 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 DCUN1D1Q96GG9 259 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 C2orf50Q96LR7 162 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 WFDC10AQ9H1F0 79 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 PCTPQ9UKL6 214 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 HECW1Q76N89 1606 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 ZANQ9Y493 2812 aa-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 HRNRQ86YZ3 2850 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-553P-201ENST00000364047 ROBO3Q96MS0 1386 aa-0.44□□□□□ -2.48
RNU6-553P-201ENST00000364047 PHRF1Q9P1Y6 1649 aaKnown RBP-0.44□□□□□ -2.48
RNU6-553P-201ENST00000364047 TIMM17BO60830 172 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms