RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 HIGD1CA8MV81 97 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 BUB1B-PAK6H3BSN5 160 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 CCL20P78556 96 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 SLC25A48Q6ZT89 311 aaKnown RBP9.02□□□□□ -0.97
CLIP1-203ENST00000361654 DPRXA6NFQ7 191 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 IGHV3-53P01767 116 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 ZNF876PQ49A33 203 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 C6orf226Q5I0X4 101 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 FAM90A2PQ658T7 463 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 F5H768 121 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 PAX2Q02962 417 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 REG4Q9BYZ8 158 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 FBLN5Q9UBX5 448 aa9.02□□□□□ -0.97
CLIP1-203ENST00000361654 COL11A2P13942 1736 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-203ENST00000361654 CGB7P0DN87 165 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 ZNF138P52744 262 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 NABP1Q96AH0 204 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
CLIP1-203ENST00000361654 FCN3O75636 299 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 GNG5P63218 68 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 STRCP1A6NGW2 1772 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 SLC17A3O00476 420 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 COL8A2P25067 703 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 NBL1P41271 181 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 UBE2E1P51965 193 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 FLVCR1-AS1Q8TAF5 88 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 ATP5G3P48201 142 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 ERCC8Q13216 396 aa9.01□□□□□ -0.97
CLIP1-203ENST00000361654 MST1P26927 711 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 SYNJ2BPP57105 145 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 RFNGQ9Y644 331 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 COL6A6A6NMZ7 2263 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 PAX4O43316 350 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 HBDP02042 147 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 IGFBP3P17936 291 aaPredicted RBP9□□□□□ -0.97
CLIP1-203ENST00000361654 GFI1BQ5VTD9 330 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 IGHV1-69P01742 117 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 TFF1P04155 84 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 LINC01559Q495D7 138 aa9□□□□□ -0.97
CLIP1-203ENST00000361654 PPIFP30405 207 aaKnown RBP8.99□□□□□ -0.97
CLIP1-203ENST00000361654 RPL15P61313 204 aaKnown RBP8.99□□□□□ -0.97
CLIP1-203ENST00000361654 RASL11AQ6T310 242 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 SRSF8Q9BRL6 282 aaKnown RBP8.99□□□□□ -0.97
CLIP1-203ENST00000361654 DPM2O94777 84 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 PYYP10082 97 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 Q71RC1 249 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-203ENST00000361654 DLX4Q92988 240 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-203ENST00000361654 CHTOPQ9Y3Y2 248 aaKnown RBP8.99□□□□□ -0.97
CLIP1-203ENST00000361654 E7EQL1 145 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 COQ2Q96H96 371 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 LYZL4Q96KX0 146 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 TRGV9Q99603 122 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 RTBDNQ9BSG5 229 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-203ENST00000361654 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 DEFB131AP59861 70 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 TEX43Q6ZNM6 134 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 IGKV1D-13A0A0B4J2D9 117 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 TOMM40O96008 361 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 IGKV1-13P0DP09 117 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 IGFL3Q6UXB1 125 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 MTURNQ8N3F0 131 aa8.99□□□□□ -0.97
CLIP1-203ENST00000361654 MST1LQ2TV78 715 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 ZNF474Q6S9Z5 364 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-203ENST00000361654 GAFA1Q96PS6 74 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 MS4A6AQ9H2W1 248 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 OSTCQ9NRP0 149 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 COL5A3P25940 1745 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-203ENST00000361654 NPIPB5A8MRT5 1133 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 OVOL3O00110 214 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 RAMP3O60896 148 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 NDUFS6O75380 124 aaKnown RBP8.98□□□□□ -0.97
CLIP1-203ENST00000361654 FXYD7P58549 80 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 FGFBP3Q8TAT2 258 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 INS-IGF2F8WCM5 200 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 SELLP14151 372 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 RPL32P62910 135 aaKnown RBP8.98□□□□□ -0.97
CLIP1-203ENST00000361654 LURAP1LQ8IV03 231 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 OR10W1Q8NGF6 305 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 SLC25A2Q9BXI2 301 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 PMS2P5A8MQ11 134 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 FOXG1P55316 489 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-203ENST00000361654 SRSF3P84103 164 aaKnown RBP8.98□□□□□ -0.97
CLIP1-203ENST00000361654 SLC25A39Q9BZJ4 359 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-203ENST00000361654 ANAPC10Q9UM13 185 aa8.98□□□□□ -0.97
CLIP1-203ENST00000361654 CACNA1IQ9P0X4 2223 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 VCYO14598 125 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 LHBP01229 141 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 ZNF124Q15973 351 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 PLEKHB2Q96CS7 222 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 PRDM13Q9H4Q3 707 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 TRAV2A0A0B4J234 112 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 SRSF6Q13247 344 aaKnown RBP8.97□□□□□ -0.97
CLIP1-203ENST00000361654 DMRTA1Q5VZB9 504 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 C1orf159Q96HA4 380 aa8.97□□□□□ -0.97
CLIP1-203ENST00000361654 ANKRD31Q8N7Z5 1873 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms