RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 FOXL1Q12952 345 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 NR2C2APQ86WQ0 139 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 RALGAPA2Q2PPJ7 1873 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 PPBPP02775 128 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 DAD1P61803 113 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 CD200R1LQ6Q8B3 271 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 FBLIM1Q8WUP2 373 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 MGST2Q99735 147 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 B4DSR2 109 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 FCN3O75636 299 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 BRD3OSQ6XYD6 125 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 THAP8Q8NA92 274 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 PRDM13Q9H4Q3 707 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 A0A0G2JK05 382 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 CD5LO43866 347 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 ZNF479Q96JC4 524 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 MIA3Q5JRA6 1907 aa8.45□□□□□ -1.06
CLIP1-202ENST00000358808 DOCK3Q8IZD9 2030 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 H3BUX3 64 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 CFHR1Q03591 330 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 KLRD1Q13241 179 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 SRRM4A7MD48 611 aaKnown RBP8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TFF1P04155 84 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 EFNA4P52798 201 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 C15orf32Q32M92 178 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 ESPL1Q14674 2120 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TRAV25A0A0B4J276 109 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TMEM14DPA8MWL7 114 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 E9PLN8 166 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 SEC11AP67812 179 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 NDPQ00604 133 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TEX38Q6PEX7 206 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 C2orf82Q6UX34 121 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 FAM110DQ8TAY7 271 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-202ENST00000358808 CHCHD2Q9Y6H1 151 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-202ENST00000358808 ABCA1O95477 2261 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TRAV9-1A0A075B6T8 112 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 C4orf51C9J302 202 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 SMIM10L1P0DMW3 83 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TMEM144Q7Z5S9 345 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 SMIM10Q96HG1 83 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 CFHR3Q02985 330 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 SPSB3Q6PJ21 355 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 C20orf204Q6ZNR8 217 aa8.44□□□□□ -1.06
CLIP1-202ENST00000358808 NPDC1Q9NQX5 325 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-202ENST00000358808 TRAV9-2A0A087WT02 112 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 ADMP35318 185 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 GAGE13Q4V321 117 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 MRAPQ8TCY5 172 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 CLPSL1A2RUU4 121 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 RAMP1O60894 148 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 SSBP2P81877 361 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-202ENST00000358808 GAGE2BQ13066 116 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 SIGMAR1Q99720 223 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 ZFAND6Q6FIF0 208 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 RMI2Q96E14 147 aa8.43□□□□□ -1.06
CLIP1-202ENST00000358808 ZNF646O15015 1829 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-202ENST00000358808 TRAV8-1A0A0A6YYK1 113 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 SERF1AO75920 110 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 IFI6P09912 130 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 CRIPAKQ8N1N5 446 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 PLPPR1Q8TBJ4 325 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 MYMXA0A1B0GTQ4 84 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 PRIMA1Q86XR5 153 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 PSPNO60542 156 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 YPEL1O60688 119 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 NCR2O95944 276 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 UCP1P25874 307 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 ZNF672Q499Z4 452 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-202ENST00000358808 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 YPEL2Q96QA6 119 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 ZSWIM8A7E2V4 1837 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 C1QTNF5Q9BXJ0 243 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 ZMAT4Q9H898 229 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 A8MXK9 166 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 IGLV3-21P80748 117 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-202ENST00000358808 ZNF329Q86UD4 541 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 MBNL3Q9NUK0 354 aaKnown RBP8.42□□□□□ -1.06
CLIP1-202ENST00000358808 ATRXP46100 2492 aa8.42□□□□□ -1.06
CLIP1-202ENST00000358808 F8VVB4 439 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 F8VWA3 439 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 IGLV3-19P01714 112 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 MORN2Q502X0 79 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 LINC01356Q8N9X3 169 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 SHISA3A0PJX4 238 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 MLNRO43193 412 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 IGHV2-26A0A0B4J1V2 119 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 CCL20P78556 96 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 Q71RC1 249 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-202ENST00000358808 SLC25A39Q9BZJ4 359 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-202ENST00000358808 LAMTOR2Q9Y2Q5 125 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 ZDBF2Q9HCK1 2354 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 TRAV5A0A0B4J249 113 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 UNQ6494/PRO21346Q6UXR6 183 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 CSTL1Q9H114 145 aa8.41□□□□□ -1.06
CLIP1-202ENST00000358808 IGHV1-18A0A0C4DH31 117 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms