RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ZNF71Q9NQZ8 489 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-203ENST00000358528 EPDR1Q9UM22 224 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 IGHV3OR16-8A0A075B7F1 116 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 A0A087X0K7 114 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 F2RL2O00254 374 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 TM4SF20Q53R12 229 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 FAM162BQ5T6X4 162 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 LINC00173Q6ZV60 143 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 EXOC3-AS1Q8N2X6 119 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 RPP21Q9H633 154 aaKnown RBP5.34□□□□□ -1.55
CSDE1-203ENST00000358528 ADAMTS20P59510 1910 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 PPIAL4EA0A075B759 164 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 FBLL1A6NHQ2 334 aaKnown RBP5.34□□□□□ -1.55
CSDE1-203ENST00000358528 PPIAL4DF5H284 164 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 CCL25O15444 150 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 IGHV1-46P01743 117 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 PPIAL4FP0DN26 164 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 CD59P13987 128 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 EIF4EBP1Q13541 118 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-203ENST00000358528 EBLN2Q6P2I7 272 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM108Q6UXF1 575 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 ZC2HC1AQ96GY0 325 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 GPR82Q96P67 336 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 C19orf24Q9BVV8 132 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 Q9H3A6 140 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 RPUSD1Q9UJJ7 312 aaKnown RBP5.34□□□□□ -1.55
CSDE1-203ENST00000358528 INSIG2Q9Y5U4 225 aa5.34□□□□□ -1.55
CSDE1-203ENST00000358528 K7EQM0 130 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 TDGF1P13385 188 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 BPIFA4PQ86YQ2 179 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 RNASE8Q8TDE3 154 aaKnown RBP5.33□□□□□ -1.56
CSDE1-203ENST00000358528 RASL11BQ9BPW5 248 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 SLC25A2Q9BXI2 301 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 TPSG1Q9NRR2 321 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 HIGD1AQ9Y241 93 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 LY96Q9Y6Y9 160 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 APOHP02749 345 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-203ENST00000358528 FCER1GP30273 86 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 NMUP48645 174 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 ARF6P62330 175 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 C2orf83Q53S99 150 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF329Q86UD4 541 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 OSR1Q8TAX0 266 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-203ENST00000358528 RPEQ96AT9 228 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF503Q96F45 646 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 SLC25A15Q9Y619 301 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 F11RQ9Y624 299 aaKnown RBP5.33□□□□□ -1.56
CSDE1-203ENST00000358528 BDP1A6H8Y1 2624 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 COL6A3P12111 3177 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 TCRBV4S1A1TA0A5B7 111 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 E7EUB6 86 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 MBNL2Q5VZF2 373 aaKnown RBP5.33□□□□□ -1.56
CSDE1-203ENST00000358528 AMMECR1LQ6DCA0 310 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-203ENST00000358528 OR4F17Q8NGA8 305 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 FBXL15Q9H469 300 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 FNDC4Q9H6D8 234 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-203ENST00000358528 HILPDAQ9Y5L2 63 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 OR2T8A6NH00 312 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 WT1-ASQ06250 92 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 STXBP6Q8NFX7 210 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 C1orf159Q96HA4 380 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 GAFA1Q96PS6 74 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 CHODLQ9H9P2 273 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 ONECUT1Q9UBC0 465 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 COX11Q9Y6N1 276 aa5.33□□□□□ -1.56
CSDE1-203ENST00000358528 DSCAMO60469 2012 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 SMIM27A0A1W2PRY6 76 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 LYNX1G3V0Z9 82 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 SP9P0CG40 484 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 LYNX1P0DP58 116 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 PAX1P15863 534 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 UBE2V1Q13404 147 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 TMEM249Q2WGJ8 235 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 C1orf162Q8NEQ5 155 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-203ENST00000358528 CACNG8Q8WXS5 425 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 TMUB1Q9BVT8 246 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 AP5S1Q9NUS5 200 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 HSPB8Q9UJY1 196 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF257Q9Y2Q1 563 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 PRSS46E5RG02 174 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 HLA-DRB1P01911 266 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 PSG1P11464 419 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 FCGR2BP31994 310 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-203ENST00000358528 CEACAM8P31997 349 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-203ENST00000358528 CSN1S1P47710 185 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 GAGE1Q13065 139 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 AARDQ4LEZ3 155 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 TIMM23BQ5SRD1 257 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 ZNF474Q6S9Z5 364 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-203ENST00000358528 C5orf17Q8NAS9 161 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 C18orf15Q96N68 181 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 PRRG2O14669 202 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 KLK10O43240 276 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 IGHV3-23P01764 117 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 CD40P25942 277 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 COMPP49747 757 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-203ENST00000358528 RIGQ13278 110 aa5.32□□□□□ -1.56
CSDE1-203ENST00000358528 PLSCR4Q9NRQ2 329 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms