RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 DEPPQ9NTK1 212 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 CEP192Q8TEP8 1941 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 IGKV1D-13A0A0B4J2D9 117 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 IGKV1-13P0DP09 117 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 CCL8P80075 99 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 ATXN8Q156A1 80 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 KLF17Q5JT82 389 aaPredicted RBP7.35□□□□□ -1.23
COL6A6-201ENST00000358511 RPRMLQ8N4K4 120 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 ZNF501Q96CX3 271 aaPredicted RBP7.35□□□□□ -1.23
COL6A6-201ENST00000358511 C1QTNF5Q9BXJ0 243 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 SRXN1Q9BYN0 137 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 KLF12Q9Y4X4 402 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 TMEM238C9JI98 176 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 NKX2-8O15522 239 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 PEAR1Q5VY43 1037 aaPredicted RBP7.35□□□□□ -1.23
COL6A6-201ENST00000358511 ZNF497Q6ZNH5 498 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 GNG5P63218 68 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 CHTOPQ9Y3Y2 248 aaKnown RBP7.35□□□□□ -1.23
COL6A6-201ENST00000358511 IGHV3-72A0A0B4J1Y9 119 aa7.35□□□□□ -1.23
COL6A6-201ENST00000358511 SCARF2Q96GP6 870 aaPredicted RBP7.35□□□□□ -1.23
COL6A6-201ENST00000358511 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.34□□□□□ -1.23
COL6A6-201ENST00000358511 SLC22A18ASQ8N1D0 253 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 OR9G1Q8NH87 305 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 ARRDC1-AS1Q9H2J1 176 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 VSIRQ9H7M9 311 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 SORL1Q92673 2214 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 F2Z2F3 143 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 LHX2P50458 406 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.23
COL6A6-201ENST00000358511 FAM214BQ7L5A3 538 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 RPP25LQ8N5L8 163 aaKnown RBP7.34□□□□□ -1.23
COL6A6-201ENST00000358511 NAA38Q9BRA0 125 aaKnown RBP7.34□□□□□ -1.23
COL6A6-201ENST00000358511 SEPSECSQ9HD40 501 aaKnown RBP7.34□□□□□ -1.23
COL6A6-201ENST00000358511 Q0VG73 95 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 ASCL2Q99929 193 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 LINC01549A6NIU2 74 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 CEACAM4O75871 244 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 CRPP02741 224 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 CGB7P0DN87 165 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 PILRBQ9UKJ0 227 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 MUC4Q99102 2169 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 ITGBL1O95965 494 aaPredicted RBP7.34□□□□□ -1.23
COL6A6-201ENST00000358511 PSG3Q16557 428 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 GP6Q9HCN6 339 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 TCRBV4S1A1TA0A5B7 111 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 LINC00271P0C7V0 271 aa7.34□□□□□ -1.23
COL6A6-201ENST00000358511 F8W1H4 67 aa7.34□□□□□ -1.24
COL6A6-201ENST00000358511 NUP35Q8NFH5 326 aa7.34□□□□□ -1.24
COL6A6-201ENST00000358511 TMEM171Q8WVE6 324 aa7.34□□□□□ -1.24
COL6A6-201ENST00000358511 ZNF48Q96MX3 618 aaPredicted RBP7.34□□□□□ -1.24
COL6A6-201ENST00000358511 ITLN1Q8WWA0 313 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 CLEC7AQ9BXN2 247 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 LTBP1Q14766 1721 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 MMP23AO75900 390 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 CLPSP04118 112 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 C1orf162Q8NEQ5 155 aaPredicted RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 CNTFRP26992 372 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 NMSQ5H8A3 153 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 TMEM8BA6NDV4 472 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 M0R2P5 195 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 IGKV3-20P01619 116 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 RPP25Q9BUL9 199 aaKnown RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 KLF2Q9Y5W3 355 aaPredicted RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 RBMY1BA6NDE4 496 aaKnown RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 RBMY1EA6NEQ0 496 aaKnown RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 RBMY1DP0C7P1 496 aaKnown RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 RBMY1A1P0DJD3 496 aaKnown RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 RBMY1CP0DJD4 496 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 NPPCP23582 126 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 IFI27P40305 119 aaPredicted RBP7.33□□□□□ -1.24
COL6A6-201ENST00000358511 K7EP13 123 aa7.33□□□□□ -1.24
COL6A6-201ENST00000358511 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 IGKV1-9A0A0C4DH69 117 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 C16orf97H3BN30 126 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 TNFRSF6BO95407 300 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 PAX1P15863 534 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 FAM90A1Q86YD7 464 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 SPANXDQ9BXN6 97 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 CD33P20138 364 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 SHISA5Q8N114 240 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 TREML4Q6UXN2 200 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 SELENOKQ9Y6D0 94 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 IGKV1D-43A0A0B4J1Z2 117 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 TNFRSF18Q9Y5U5 241 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 D6R8Y8 96 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 GHRHP01286 108 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 ZNF415Q09FC8 603 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 EEF1AKMT3Q96AZ1 226 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 CGB3P0DN86 165 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 MST1LQ2TV78 715 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 ARPC1AQ92747 370 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 A0A1W2PRX2 142 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 PRTN3P24158 256 aa7.32□□□□□ -1.24
COL6A6-201ENST00000358511 A0A1W2PQF6 199 aa7.31□□□□□ -1.24
COL6A6-201ENST00000358511 CFPP27918 469 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms