RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 TRGV11A0A075B6L2 103 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 LINC00473A8K010 186 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 ASXL3Q9C0F0 2248 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 A0A1B0GV90 55 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 ITGB1BP1O14713 200 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 C1QL4Q86Z23 238 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 SLC25A39Q9BZJ4 359 aaPredicted RBP13.42□□□□□ -0.26
SHTN1-202ENST00000355371 LY96Q9Y6Y9 160 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 DNAL4O96015 105 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 PLAURQ03405 335 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
SHTN1-202ENST00000355371 AGMATQ9BSE5 352 aa13.42□□□□□ -0.26
SHTN1-202ENST00000355371 TRAV3A0A0B4J244 114 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 BUB1B-PAK6H3BSN5 160 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 HGFACQ04756 655 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 TRGV2A0A075B6R0 118 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 FNDC10F2Z333 226 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 C15orf32Q32M92 178 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 ORMDL2Q53FV1 153 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 SPATA31B1PQ5VZV4 182 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 RASL11AQ6T310 242 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 A0A1W2PRX2 142 aa13.41□□□□□ -0.26
SHTN1-202ENST00000355371 C5orf64Q2M2E5 130 aa13.4□□□□□ -0.26
SHTN1-202ENST00000355371 LINC01549A6NIU2 74 aa13.4□□□□□ -0.26
SHTN1-202ENST00000355371 COLCA2A8K830 154 aa13.4□□□□□ -0.26
SHTN1-202ENST00000355371 IFI27P40305 119 aaPredicted RBP13.4□□□□□ -0.26
SHTN1-202ENST00000355371 SEPSECSQ9HD40 501 aaKnown RBP13.4□□□□□ -0.26
SHTN1-202ENST00000355371 OR13C6PQ8NH95 151 aa13.4□□□□□ -0.26
SHTN1-202ENST00000355371 NDUFA3O95167 84 aa13.4□□□□□ -0.27
SHTN1-202ENST00000355371 SCGB1A1P11684 91 aa13.4□□□□□ -0.27
SHTN1-202ENST00000355371 FBLN7Q53RD9 439 aa13.4□□□□□ -0.27
SHTN1-202ENST00000355371 LINC01551Q86U37 167 aa13.4□□□□□ -0.27
SHTN1-202ENST00000355371 PMS2P5A8MQ11 134 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 C3orf36Q3SXR2 165 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 REG4Q9BYZ8 158 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
SHTN1-202ENST00000355371 TRAV9-2A0A087WT02 112 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 B4DSR2 109 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 ST6GALNAC6Q969X2 333 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 CYSLTR1Q9Y271 337 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 TRBV7-1A0A0A6YYK4 115 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
SHTN1-202ENST00000355371 LINC01559Q495D7 138 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 VCX2Q9H322 139 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 ZNF581Q9P0T4 197 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 COL4A6Q14031 1691 aa13.39□□□□□ -0.27
SHTN1-202ENST00000355371 TCRAP04437 139 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 KLRD1Q13241 179 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 TMEM155Q4W5P6 130 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 ZNF585BQ52M93 769 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 SIGLEC9Q9Y336 463 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 SCRT1Q9BWW7 348 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 JKAMPQ9P055 326 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 SNAI2O43623 268 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
SHTN1-202ENST00000355371 C15orf62A8K5M9 175 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 DPM2O94777 84 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 NTF4P34130 210 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 SRSF6Q13247 344 aaKnown RBP13.38□□□□□ -0.27
SHTN1-202ENST00000355371 NIT1Q86X76 327 aa13.38□□□□□ -0.27
SHTN1-202ENST00000355371 LY6G6EA0A0G2JKS1 128 aa13.37□□□□□ -0.27
SHTN1-202ENST00000355371 LYPD1Q8N2G4 141 aa13.37□□□□□ -0.27
SHTN1-202ENST00000355371 NDUFAF3Q9BU61 184 aa13.37□□□□□ -0.27
SHTN1-202ENST00000355371 U3KQA8 63 aa13.37□□□□□ -0.27
SHTN1-202ENST00000355371 CXCL1P09341 107 aa13.37□□□□□ -0.27
SHTN1-202ENST00000355371 LAMTOR2Q9Y2Q5 125 aa13.37□□□□□ -0.27
SHTN1-202ENST00000355371 TCF20Q9UGU0 1960 aaKnown RBP13.37□□□□□ -0.27
SHTN1-202ENST00000355371 RNASE1P07998 156 aaKnown RBP13.37□□□□□ -0.27
SHTN1-202ENST00000355371 C5orf24Q7Z6I8 188 aa13.37□□□□□ -0.27
SHTN1-202ENST00000355371 E9PQ18 207 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 TSC2P49815 1807 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
SHTN1-202ENST00000355371 HIST1H2BLQ99880 126 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 ANAPC10Q9UM13 185 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 NPIPB5A8MRT5 1133 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 GNLYP22749 145 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 LMO1P25800 156 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 CNTFRP26992 372 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 C9orf139Q6ZV77 190 aa13.36□□□□□ -0.27
SHTN1-202ENST00000355371 MGAMO43451 1857 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 MSRB2Q9Y3D2 182 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 HIST3H2BBQ8N257 126 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 EXOC3-AS1Q8N2X6 119 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 USMG5Q96IX5 58 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 IGKV2-40A0A087WW87 121 aaPredicted RBP13.35□□□□□ -0.27
SHTN1-202ENST00000355371 A0A0G2JRQ6 117 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 IGKV2D-40P01614 121 aaPredicted RBP13.35□□□□□ -0.27
SHTN1-202ENST00000355371 RNASE2P10153 161 aaKnown RBP13.35□□□□□ -0.27
SHTN1-202ENST00000355371 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
SHTN1-202ENST00000355371 NCOR1P1Q9H4R4 102 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 LINC00527Q9UJ94 153 aa13.35□□□□□ -0.27
SHTN1-202ENST00000355371 TOMM40O96008 361 aa13.34□□□□□ -0.27
SHTN1-202ENST00000355371 PPIFP30405 207 aaKnown RBP13.34□□□□□ -0.27
SHTN1-202ENST00000355371 SMPXQ9UHP9 88 aa13.34□□□□□ -0.27
SHTN1-202ENST00000355371 TMEM219Q86XT9 240 aa13.34□□□□□ -0.27
SHTN1-202ENST00000355371 PROK2Q9HC23 129 aa13.34□□□□□ -0.27
SHTN1-202ENST00000355371 IGFL3Q6UXB1 125 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms