RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TEX36Q5VZQ5 186 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 MAP1LC3AQ9H492 121 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 CENPFP49454 3210 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 HEATR5AQ86XA9 2040 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 TRBV20OR9-2A0A075B6H5 130 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 LINC00473A8K010 186 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 OVOL1O14753 267 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 ZNF562Q6V9R5 426 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 RCC1LQ96I51 464 aaKnown RBP7.89□□□□□ -1.15
GABPA-201ENST00000354828 UBE2E2Q96LR5 201 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 F11RQ9Y624 299 aaKnown RBP7.89□□□□□ -1.15
GABPA-201ENST00000354828 G3V318 75 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 PSG1P11464 419 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 FHITP49789 147 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 C1QTNF4Q9BXJ3 329 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 SMDT1Q9H4I9 107 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 CEP295Q9C0D2 2601 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 IGHV4-59P01825 116 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 IGKV1-16P04430 117 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 OR11H1Q8NG94 326 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 OTORQ9NRC9 128 aa7.89□□□□□ -1.15
GABPA-201ENST00000354828 RIPPLY3P57055 190 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 PMS2P11Q13670 270 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 LCN12Q6JVE5 192 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 C10orf105Q8TEF2 133 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 GSX1Q9H4S2 264 aaPredicted RBP7.88□□□□□ -1.15
GABPA-201ENST00000354828 DAZ1Q9NQZ3 744 aaKnown RBP7.88□□□□□ -1.15
GABPA-201ENST00000354828 ARFGEF3Q5TH69 2177 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 MED13Q9UHV7 2174 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 TRBV6-6A0A0A6YYG2 114 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 M0R3E3 92 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 GEMIN7Q9H840 131 aaKnown RBP7.88□□□□□ -1.15
GABPA-201ENST00000354828 PTPRSQ13332 1948 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 C22orf46C9J442 243 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 PYYP10082 97 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 PRB4P10163 310 aaPredicted RBP7.88□□□□□ -1.15
GABPA-201ENST00000354828 FAM3BP58499 235 aaPredicted RBP7.88□□□□□ -1.15
GABPA-201ENST00000354828 FXYD7P58549 80 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 FOXL1Q12952 345 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 WDR86Q86TI4 376 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 VAMP8Q9BV40 100 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 TMEM191AQ9H0A3 160 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 FCN3O75636 299 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 FAM120AOSQ5T036 256 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 HSPB8Q9UJY1 196 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 VPREB3Q9UKI3 123 aa7.88□□□□□ -1.15
GABPA-201ENST00000354828 ELOBQ15370 118 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 DTX2Q86UW9 622 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 CHAC2Q8WUX2 184 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 RARRES2Q99969 163 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 TRGV11A0A075B6L2 103 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 FABP5P3A8MUU1 101 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 DKK1O94907 266 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
GABPA-201ENST00000354828 MRAPQ8TCY5 172 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 WISP2O76076 250 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 IGHV2-70P01814 119 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 RPL29P47914 159 aaKnown RBP7.87□□□□□ -1.15
GABPA-201ENST00000354828 SUMO2P61956 95 aaKnown RBP7.87□□□□□ -1.15
GABPA-201ENST00000354828 DEFA6Q01524 100 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 ASCL2Q99929 193 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 DANCRP0C864 163 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 CNTFRP26992 372 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 CCKARP32238 428 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
GABPA-201ENST00000354828 WDR87Q6ZQQ6 2873 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 SEM1Q6ZVN7 128 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 FMC1Q96HJ9 113 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 VGLL1Q99990 258 aa7.87□□□□□ -1.15
GABPA-201ENST00000354828 LMO1P25800 156 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 GNG5P63218 68 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 HIST2H2BCQ6DN03 193 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 CIARTQ8N365 385 aaPredicted RBP7.86□□□□□ -1.15
GABPA-201ENST00000354828 OR9G4Q8NGQ1 327 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 PARLQ9H300 379 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 FBLL1A6NHQ2 334 aaKnown RBP7.86□□□□□ -1.15
GABPA-201ENST00000354828 DEFB131AP59861 70 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 REC114Q7Z4M0 266 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 TBX15Q96SF7 602 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 TLN1Q9Y490 2541 aaKnown RBP7.86□□□□□ -1.15
GABPA-201ENST00000354828 SPTBN4Q9H254 2564 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 LRRK1Q38SD2 2015 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 CRPP02741 224 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 Q5BKY6 102 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 NIT2Q9NQR4 276 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 KAAG1Q9UBP8 84 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 TP53BP1Q12888 1972 aaPredicted RBP7.86□□□□□ -1.15
GABPA-201ENST00000354828 PMS2P5A8MQ11 134 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 PAPPA-AS1Q5QFB9 102 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 PIEZO2Q9H5I5 2752 aa7.86□□□□□ -1.15
GABPA-201ENST00000354828 LDLRAD4O15165 306 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 PRSS2P07478 247 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 C11orf91Q3C1V1 193 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 ASCL4Q6XD76 172 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 TMEM158Q8WZ71 300 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 SHANK1Q9Y566 2161 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 PHOX2AO14813 284 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 ID3Q02535 119 aa7.85□□□□□ -1.15
GABPA-201ENST00000354828 TMEM183BQ1AE95 376 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms