RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 OR9G1Q8NH87 305 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 PILRBQ9UKJ0 227 aa6.75□□□□□ -1.33
SCN8A-201ENST00000354534 CGB7P0DN87 165 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 HOXB3P14651 431 aaPredicted RBP6.74□□□□□ -1.33
SCN8A-201ENST00000354534 FOXL2P58012 376 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 C19orf48Q6RUI8 117 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 SLC25A38Q96DW6 304 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 CGB3P0DN86 165 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 C1orf194Q5T5A4 169 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 PLXNA1Q9UIW2 1896 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 UPK2O00526 184 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 RPUSD1Q9UJJ7 312 aaKnown RBP6.74□□□□□ -1.33
SCN8A-201ENST00000354534 PTPRDP23468 1912 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 DAD1P61803 113 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 LCN12Q6JVE5 192 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 C1orf210Q8IVY1 113 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 CCL20P78556 96 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 PAPPA2Q9BXP8 1791 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 MYOD1P15172 320 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 ZP4Q12836 540 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 IGHV1OR21-1A0A087WYE8 117 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 LIFP15018 202 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 RFLNBQ8N5W9 214 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 SHISA9B4DS77 424 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 FGF6P10767 208 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 RSPO2Q6UXX9 243 aaPredicted RBP6.74□□□□□ -1.33
SCN8A-201ENST00000354534 IMMP1LQ96LU5 166 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 TMEM190Q8WZ59 177 aa6.74□□□□□ -1.33
SCN8A-201ENST00000354534 PTPRFP10586 1907 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 LINC01549A6NIU2 74 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 DUSP14O95147 198 aaKnown RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 PPDPFLQ8WWR9 84 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 PPP1R3EQ9H7J1 279 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 CRLF1O75462 422 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 ZNF708P17019 499 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 IGFBP6P24592 240 aaPredicted RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 TMEM196Q5HYL7 178 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 CSTL1Q9H114 145 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 FAM231BA6NCW3 169 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 MSGN1A6NI15 193 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 F8VVB4 439 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 F8VWA3 439 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 F8W1H4 67 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 FOXH1O75593 365 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 NSUN5P1Q3KNT7 163 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 TRAV14DV4A0A0A6YYC5 116 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 KNCNA6PVL3 124 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 MCRIP2Q9BUT9 160 aaKnown RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 AMBPP02760 352 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 PFN2P35080 140 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 SPATA25Q9BR10 227 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 DUSP15Q9H1R2 295 aaPredicted RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 VDAC2P45880 294 aaPredicted RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 RPL36AP83881 106 aaKnown RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 PRR31Q5SQ13 230 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 RPL36ALQ969Q0 106 aaKnown RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 SLC25A39Q9BZJ4 359 aaPredicted RBP6.73□□□□□ -1.33
SCN8A-201ENST00000354534 HRKO00198 91 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 HEPN1Q6WQI6 88 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 STRCP1A6NGW2 1772 aa6.73□□□□□ -1.33
SCN8A-201ENST00000354534 ARHGAP21Q5T5U3 1957 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 FOXG1P55316 489 aaPredicted RBP6.72□□□□□ -1.33
SCN8A-201ENST00000354534 FAM27BQ5VT28 67 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 LINC01555Q8NAE3 123 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 NRTNQ99748 197 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 SPG11Q96JI7 2443 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 TRGV1A0A0A0MS02 117 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 HIST3H2BBQ8N257 126 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 PSG8Q9UQ74 426 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 OCC1Q8TAD7 63 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 IGKV2-40A0A087WW87 121 aaPredicted RBP6.72□□□□□ -1.33
SCN8A-201ENST00000354534 A0A0U1RQV1 116 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 IGKV2D-40P01614 121 aaPredicted RBP6.72□□□□□ -1.33
SCN8A-201ENST00000354534 GREB1Q4ZG55 1949 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 A0A1B0GWJ7 208 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 KIAA0040Q15053 153 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 TMEM158Q8WZ71 300 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 VCYO14598 125 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 CCL4P13236 92 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 DEFB121Q5J5C9 76 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 OR11H6Q8NGC7 330 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 PLA2G2FQ9BZM2 168 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 NGFRP08138 427 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 DOCK4Q8N1I0 1966 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 MRPL23Q16540 153 aaKnown RBP6.72□□□□□ -1.33
SCN8A-201ENST00000354534 SIGLEC15Q6ZMC9 328 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 DEPPQ9NTK1 212 aa6.72□□□□□ -1.33
SCN8A-201ENST00000354534 IL18BPO95998 194 aa6.71□□□□□ -1.33
SCN8A-201ENST00000354534 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.33
SCN8A-201ENST00000354534 CTGFP29279 349 aa6.71□□□□□ -1.33
SCN8A-201ENST00000354534 IFITM3Q01628 133 aa6.71□□□□□ -1.33
SCN8A-201ENST00000354534 RPRMLQ8N4K4 120 aa6.71□□□□□ -1.33
SCN8A-201ENST00000354534 TFF2Q03403 129 aa6.71□□□□□ -1.33
SCN8A-201ENST00000354534 TTTY12Q9BZ98 90 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms