RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 OVOL1O14753 267 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 CD69Q07108 199 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 LINC01545Q5VT33 79 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 DTX4Q9Y2E6 619 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 TFF3Q07654 80 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 C2orf82Q6UX34 121 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 SYS1-DBNDD2H3BUS1 97 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 OCIAD2Q56VL3 154 aa11.17□□□□□ -0.62
COL6A3-202ENST00000347401 LYL1P12980 280 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 LAIR2Q6ISS4 152 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 NEU4Q8WWR8 484 aaPredicted RBP11.16□□□□□ -0.62
COL6A3-202ENST00000347401 LY6G6FQ5SQ64 297 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 LINC00114Q6XXX2 140 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 TMEM92Q6UXU6 159 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 J3QRE1 110 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 BCL6BQ8N143 479 aaPredicted RBP11.16□□□□□ -0.62
COL6A3-202ENST00000347401 ST6GALNAC3Q8NDV1 305 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 DUTP33316 252 aaKnown RBP11.16□□□□□ -0.62
COL6A3-202ENST00000347401 RNF125Q96EQ8 232 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
COL6A3-202ENST00000347401 AGFG2O95081 481 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 TGFAP01135 160 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 SRSF2Q01130 221 aaKnown RBP11.15□□□□□ -0.62
COL6A3-202ENST00000347401 Q0VG73 95 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.62
COL6A3-202ENST00000347401 A0A1W2PRD5 423 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 A0A1W2PRF3 423 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 A0A1W2PRM7 423 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 AMELYQ99218 206 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 JPT2Q9H910 190 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 IGKV1D-42A0A075B6H8 117 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 TDGF1P3P51864 188 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 PPDPFLQ8WWR9 84 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 GGTLC1Q9BX51 225 aa11.15□□□□□ -0.62
COL6A3-202ENST00000347401 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.63
COL6A3-202ENST00000347401 SRD5A1P18405 259 aa11.15□□□□□ -0.63
COL6A3-202ENST00000347401 PPP1R27Q86WC6 154 aa11.15□□□□□ -0.63
COL6A3-202ENST00000347401 SSC4DQ8WTU2 575 aa11.15□□□□□ -0.63
COL6A3-202ENST00000347401 TRGV9Q99603 122 aa11.15□□□□□ -0.63
COL6A3-202ENST00000347401 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 LINC01551Q86U37 167 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 ATP5G3P48201 142 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 EGR4Q05215 589 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 CENPVL1A0A0U1RR11 272 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 GLRX5Q86SX6 157 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 APOBEC3AP31941 199 aaPredicted RBP11.14□□□□□ -0.63
COL6A3-202ENST00000347401 UTF1Q5T230 341 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 A0A1W2PPE3 182 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 C12orf77C9JDV5 145 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 VGLL1Q99990 258 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
COL6A3-202ENST00000347401 VCYO14598 125 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 TRGV3P03979 118 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 RNF5Q99942 180 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 IFITM1P13164 125 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 PDLIM4P50479 330 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 NDUFC2O95298 119 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 ZNHIT1O43257 154 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 Q6ZS49 121 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 PTPN13Q12923 2485 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 CCL21O00585 134 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 GFRA3O60609 400 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 TRACP01848 142 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 REG1AP05451 166 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 TFPI2P48307 235 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 OCC1Q8TAD7 63 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 NBR2O15453 112 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 NEUROG3Q9Y4Z2 214 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 F8WEM9 126 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 EFEMP2O95967 443 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 PRSS12P56730 875 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 DPH3P1Q9H4G8 78 aa11.13□□□□□ -0.63
COL6A3-202ENST00000347401 SNAI2O43623 268 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 Q6ZS52 159 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 DSCAMO60469 2012 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 SPSB3Q6PJ21 355 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 WFDC6Q9BQY6 131 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 CD28P10747 220 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 PRR32B1ATL7 298 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 MRPL14Q6P1L8 145 aaKnown RBP11.12□□□□□ -0.63
COL6A3-202ENST00000347401 MYMXA0A1B0GTQ4 84 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 IL18BPO95998 194 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 CFPP27918 469 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 K7EMI3 77 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 TMEM52Q8NDY8 209 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
COL6A3-202ENST00000347401 CELA2BP08218 269 aaPredicted RBP11.11□□□□□ -0.63
COL6A3-202ENST00000347401 REG4Q9BYZ8 158 aa11.11□□□□□ -0.63
COL6A3-202ENST00000347401 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
COL6A3-202ENST00000347401 TNS1Q9HBL0 1735 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms