RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 HIST1H4AP62805 103 aaKnown RBP16.25■□□□□ 0.19
HDAC4-201ENST00000345617 FBXL7Q9UJT9 491 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 CD7P09564 240 aa16.25■□□□□ 0.19
HDAC4-201ENST00000345617 IGFBP3P17936 291 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-201ENST00000345617 LHX2P50458 406 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 GAGE1Q13065 139 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 MIR17HGQ75NE6 70 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 SPINK2P20155 84 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 MUC4Q99102 2169 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 BCL6BQ8N143 479 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-201ENST00000345617 CCL19Q99731 98 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 A0A0G2JK05 382 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 H3BTX0 84 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 EFNB3Q15768 340 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 ZNF497Q6ZNH5 498 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 FGF11Q92914 225 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 GTSF1LQ9H1H1 148 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 TRGV2A0A075B6R0 118 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 C12orf77C9JDV5 145 aa16.24■□□□□ 0.19
HDAC4-201ENST00000345617 SAA1P0DJI8 122 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-201ENST00000345617 PDLIM4P50479 330 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 IGLV3-21P80748 117 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-201ENST00000345617 PLSCR4Q9NRQ2 329 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 PRRC2AP48634 2157 aaKnown RBP16.23■□□□□ 0.19
HDAC4-201ENST00000345617 SPEM2Q0P670 501 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 BTCP35070 178 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 C8orf46Q8TAG6 207 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 GFRA4Q9GZZ7 299 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 KIR3DS1Q14943 382 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 GUSBP1Q15486 140 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 POU2AF1Q16633 256 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 MAJINQ3KP22 176 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-201ENST00000345617 MYO18BQ8IUG5 2567 aa16.23■□□□□ 0.19
HDAC4-201ENST00000345617 ZNHIT1O43257 154 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 CD5LO43866 347 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 NBR2O15453 112 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 PTPN13Q12923 2485 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 F8WEM9 126 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 PF4P02776 101 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 CCL4P13236 92 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 TNFRSF14Q92956 283 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 EGR1P18146 543 aa16.22■□□□□ 0.19
HDAC4-201ENST00000345617 JMJD8Q96S16 334 aa16.21■□□□□ 0.19
HDAC4-201ENST00000345617 LINC01587Q99440 93 aa16.21■□□□□ 0.19
HDAC4-201ENST00000345617 REPIN1Q9BWE0 567 aaKnown RBP16.21■□□□□ 0.19
HDAC4-201ENST00000345617 FAM89BQ8N5H3 189 aa16.21■□□□□ 0.19
HDAC4-201ENST00000345617 SYS1-DBNDD2H3BUS1 97 aa16.21■□□□□ 0.19
HDAC4-201ENST00000345617 C9orf153Q5TBE3 101 aa16.21■□□□□ 0.19
HDAC4-201ENST00000345617 OCIAD2Q56VL3 154 aa16.21■□□□□ 0.18
HDAC4-201ENST00000345617 OVOL1O14753 267 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 C17orf98A8MV24 154 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 TMEM258P61165 79 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 EIF4EBP2Q13542 120 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-201ENST00000345617 LYPD1Q8N2G4 141 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 CCL1P22362 96 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 PPP1R27Q86WC6 154 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 APOBEC3AP31941 199 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-201ENST00000345617 CENPVQ7Z7K6 275 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-201ENST00000345617 PRCDQ00LT1 54 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 LY6G6FQ5SQ64 297 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 CITED1Q99966 193 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 SAA2-SAA4A0A096LPE2 208 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 IGKV1D-33P01593 117 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 IGKV1-33P01594 117 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 SAA2P0DJI9 122 aaPredicted RBP16.2■□□□□ 0.18
HDAC4-201ENST00000345617 SMRP1Q8NCR6 262 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 R3HDMLQ9H3Y0 253 aa16.2■□□□□ 0.18
HDAC4-201ENST00000345617 FNDC10F2Z333 226 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 LEAP2Q969E1 77 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 SRXN1Q9BYN0 137 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 NEU4Q8WWR8 484 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-201ENST00000345617 SRD5A1P18405 259 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 COX6A1P12074 109 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 COX6B1P14854 86 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 IFITM1P13164 125 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 LAIR2Q6ISS4 152 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 LAMTOR3Q9UHA4 124 aa16.19■□□□□ 0.18
HDAC4-201ENST00000345617 MRPS18CQ9Y3D5 142 aaKnown RBP16.18■□□□□ 0.18
HDAC4-201ENST00000345617 RAMP3O60896 148 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 ZNRF1Q8ND25 227 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 A6NNC1 897 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 TEX43Q6ZNM6 134 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 VGLL1Q99990 258 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 SMIM10L1P0DMW3 83 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 SFTA2Q6UW10 78 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 SMIM10Q96HG1 83 aa16.18■□□□□ 0.18
HDAC4-201ENST00000345617 ZNF415Q09FC8 603 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 OCC1Q8TAD7 63 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 NEUROG3Q9Y4Z2 214 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 ATP5J2P56134 94 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 IQCF6A8MYZ5 107 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 SELLP14151 372 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 UBE2WQ96B02 151 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 MYMXA0A1B0GTQ4 84 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 IGHV3-48P01763 117 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 PPDPFLQ8WWR9 84 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 TDGF1P3P51864 188 aa16.17■□□□□ 0.18
HDAC4-201ENST00000345617 ZNF106Q9H2Y7 1883 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms