RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 MFAP4P55083 255 aa12.67□□□□□ -0.38
PTPRU-201ENST00000345512 TRBV20OR9-2A0A075B6H5 130 aa12.67□□□□□ -0.38
PTPRU-201ENST00000345512 NPSP0C0P6 89 aa12.67□□□□□ -0.38
PTPRU-201ENST00000345512 BMI1P35226 326 aa12.67□□□□□ -0.38
PTPRU-201ENST00000345512 F11RQ9Y624 299 aaKnown RBP12.67□□□□□ -0.38
PTPRU-201ENST00000345512 CACNA1BQ00975 2339 aa12.67□□□□□ -0.38
PTPRU-201ENST00000345512 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 RELQ04864 619 aaPredicted RBP12.66□□□□□ -0.38
PTPRU-201ENST00000345512 ATP5L2Q7Z4Y8 100 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 C18orf32Q8TCD1 76 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 H0YJW9 148 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 TSPOP30536 169 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 TMEM200BQ69YZ2 307 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 C11orf52Q96A22 123 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 C5orf30Q96GV9 206 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 MRPL27Q9P0M9 148 aaKnown RBP12.66□□□□□ -0.38
PTPRU-201ENST00000345512 COL6A6A6NMZ7 2263 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 TMEM249Q2WGJ8 235 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 FBLN7Q53RD9 439 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 PPP1R27Q86WC6 154 aa12.66□□□□□ -0.38
PTPRU-201ENST00000345512 TRAV8-1A0A0A6YYK1 113 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 CGB1A6NKQ9 187 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 TMEM167AQ8TBQ9 72 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 PRELID3AQ96N28 172 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 OTORQ9NRC9 128 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 C1RLQ9NZP8 487 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 GCSHP23434 173 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 C17orf58Q2M2W7 97 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 TDRG1Q3Y452 100 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 ZNF788Q6ZQV5 615 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 MRPL52Q86TS9 123 aaKnown RBP12.65□□□□□ -0.38
PTPRU-201ENST00000345512 CHD7Q9P2D1 2997 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 GOSR1O95249 250 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 ZNF474Q6S9Z5 364 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-201ENST00000345512 ZNF841Q6ZN19 808 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 C18orf15Q96N68 181 aa12.65□□□□□ -0.38
PTPRU-201ENST00000345512 OR2T8A6NH00 312 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 RPL7P18124 248 aaKnown RBP12.64□□□□□ -0.39
PTPRU-201ENST00000345512 SLAQ13239 276 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 EXOC3-AS1Q8N2X6 119 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 CIARTQ8N365 385 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-201ENST00000345512 RCHY1Q96PM5 261 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 PEF1Q9UBV8 284 aaKnown RBP12.64□□□□□ -0.39
PTPRU-201ENST00000345512 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 TMEM133Q9H2Q1 129 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 DCAF16Q9NXF7 216 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
PTPRU-201ENST00000345512 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 ZNF138P52744 262 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 KIR3DL3Q8N743 410 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 ZNF414Q96IQ9 312 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 MALRD1Q5VYJ5 2156 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 IGHV3OR16-8A0A075B7F1 116 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 MMP23AO75900 390 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 LOXL3P58215 753 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 PRR20EP86478 221 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 PRR20CP86479 221 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 PRR20DP86480 221 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 PRR20BP86481 221 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 PRR20AP86496 221 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 SPANXN1Q5VSR9 72 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 ZNF329Q86UD4 541 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 WFDC3Q8IUB2 231 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 MYOZ3Q8TDC0 251 aa12.64□□□□□ -0.39
PTPRU-201ENST00000345512 KIR2DL5BA0A0G2JN68 375 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 KIR2DL5BA0A0G2JPC4 375 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 TCRAP04437 139 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 KIR2DL5AQ8N109 375 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 FAM57AQ8TBR7 257 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 MCRIP2Q9BUT9 160 aaKnown RBP12.63□□□□□ -0.39
PTPRU-201ENST00000345512 CREBBPQ92793 2442 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 TRAV30A0A087WSZ9 112 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 IGHV3-23P01764 117 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 IGLC2P0DOY2 106 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 IGLC3P0DOY3 106 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 TPTE2P1Q5T6R2 138 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 C8orf46Q8TAG6 207 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 MAP1LC3AQ9H492 121 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 LSM4Q9Y4Z0 139 aaKnown RBP12.63□□□□□ -0.39
PTPRU-201ENST00000345512 IGKV3-7A0A075B6H7 116 aa12.63□□□□□ -0.39
PTPRU-201ENST00000345512 CHCHD1Q96BP2 118 aaKnown RBP12.63□□□□□ -0.39
PTPRU-201ENST00000345512 CDX4O14627 284 aaPredicted RBP12.62□□□□□ -0.39
PTPRU-201ENST00000345512 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 PSG1P11464 419 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 TMPRSS3P57727 454 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 MPV17L2Q567V2 206 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 ST20Q9HBF5 79 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 A1L4Q6 167 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 LYNX1G3V0Z9 82 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 LYNX1P0DP58 116 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 CD24P25063 80 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 GPR183P32249 361 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 IGHV3OR16-13A0A075B7E8 117 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 IGHV3-74A0A0B4J1X5 117 aa12.62□□□□□ -0.39
PTPRU-201ENST00000345512 SH2D7A6NKC9 451 aaPredicted RBP12.62□□□□□ -0.39
PTPRU-201ENST00000345512 SRRM4A7MD48 611 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms