RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
AC008543.1-201ENST00000344893 TMEM54Q969K7 222 aa7.38□□□□□ -1.23
AC008543.1-201ENST00000344893 MBD6Q96DN6 1003 aa7.38□□□□□ -1.23
AC008543.1-201ENST00000344893 ZNF488Q96MN9 340 aa7.38□□□□□ -1.23
AC008543.1-201ENST00000344893 EXPH5Q8NEV8 1989 aa7.38□□□□□ -1.23
AC008543.1-201ENST00000344893 ACTL6BO94805 426 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 TCTAP57738 103 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 RPL30P62888 115 aaKnown RBP7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 GUSBP1Q15486 140 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 TRAT1Q6PIZ9 186 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 ZNF808Q8N4W9 903 aaPredicted RBP7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 CHCHD1Q96BP2 118 aaKnown RBP7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 TRAV24A0A0B4J272 114 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 ZNF716A6NP11 495 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 LIPFP07098 398 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 FGF6P10767 208 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 GATA3P23771 443 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 ATP5G2Q06055 141 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 SLC25A53Q5H9E4 307 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 FOXI2Q6ZQN5 318 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 SNRNP40Q96DI7 357 aaKnown RBP7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 FGF23Q9GZV9 251 aaPredicted RBP7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 PGPEP1Q9NXJ5 209 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 CHD6Q8TD26 2715 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 SYNGR1O43759 233 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 TSPAN13O95857 204 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 FCGR2BP31994 310 aaPredicted RBP7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 ZNF138P52744 262 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 NRN1LQ496H8 165 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 LINC01545Q5VT33 79 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 Q6ZR03 302 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 TEX45Q8NA69 505 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 DUSP13Q9UII6 198 aa7.37□□□□□ -1.23
AC008543.1-201ENST00000344893 TRBV6-6A0A0A6YYG2 114 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 HIGD1CA8MV81 97 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 WFDC2Q14508 124 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 MIR17HGQ75NE6 70 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 SPAG8Q99932 426 aaPredicted RBP7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 C1QTNF5Q9BXJ0 243 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 USP9XQ93008 2570 aaPredicted RBP7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 C17orf98A8MV24 154 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 TIMM23BQ5SRD1 257 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 FAM214BQ7L5A3 538 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 MTURNQ8N3F0 131 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 IGF2BP2-AS1Q96M15 143 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 MRPL16Q9NX20 251 aaKnown RBP7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 HSPB8Q9UJY1 196 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 TRAPPC2LQ9UL33 140 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 COL27A1Q8IZC6 1860 aaPredicted RBP7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 UTP20O75691 2785 aaKnown RBP7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 A1L4Q6 167 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 GGTLC3B5MD39 225 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 NPIPB11E5RHQ5 1161 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 SLC25A17O43808 307 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 TM4SF20Q53R12 229 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 SH2D6Q7Z4S9 175 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 OR4A16Q8NH70 328 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 LINC00479Q96M42 142 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 VGLL1Q99990 258 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 PLEKHA3Q9HB20 300 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 IDI2-AS1Q9NZ38 188 aa7.36□□□□□ -1.23
AC008543.1-201ENST00000344893 ZNF503-AS2A6NEH8 195 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 FAM90A27PA6NNH2 459 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 VWC2LB2RUY7 222 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 NGFP01138 241 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 TMPRSS3P57727 454 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 RTL8BQ17RB0 113 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 ZNF645Q8N7E2 425 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 PRR7Q8TB68 274 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 TLN2Q9Y4G6 2542 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 IGHV3-7P01780 117 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 ETDBQ3ZM63 59 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 RNF138Q8WVD3 245 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 ADTRPQ96IZ2 230 aa7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 USP9YO00507 2555 aaPredicted RBP7.35□□□□□ -1.23
AC008543.1-201ENST00000344893 KBTBD11-OT1A0A1B0GTJ5 212 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 K7ENP7 123 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 BRWD1-AS2P59051 145 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 LINC00205P59089 165 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 HOXA4Q00056 320 aaPredicted RBP7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 PLP2Q04941 152 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 INO80CQ6PI98 192 aaPredicted RBP7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 CXorf67Q86X51 503 aaPredicted RBP7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 GRAMD2BQ96HH9 432 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 HEYLQ9NQ87 328 aaPredicted RBP7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 TMEM167BQ9NRX6 74 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 TACC2O95359 2948 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 PRRG2O14669 202 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 NCR2O95944 276 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 OR9G9P0C7N8 305 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 PSG8Q9UQ74 426 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 CSPG4Q6UVK1 2322 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 OR11H12B2RN74 326 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 CSN3P07498 182 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 SMIM13P0DJ93 91 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 FAM27E3Q08E93 113 aa7.34□□□□□ -1.23
AC008543.1-201ENST00000344893 CATR1Q13166 79 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms