RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 B4DEV8 164 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 PSG1P11464 419 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 AREGP15514 252 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 DEFB131AP59861 70 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 C9orf66Q5T8R8 295 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 FCN3O75636 299 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 RSPO1Q2MKA7 263 aaPredicted RBP10.34□□□□□ -0.75
LIN54-201ENST00000340417 VGLL1Q99990 258 aa10.34□□□□□ -0.75
LIN54-201ENST00000340417 PSMG3Q9BT73 122 aaPredicted RBP10.34□□□□□ -0.75
LIN54-201ENST00000340417 HERVK_113P61574 105 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 MEF2BQ02080 365 aaPredicted RBP10.33□□□□□ -0.76
LIN54-201ENST00000340417 FOXC2Q99958 501 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 OTORQ9NRC9 128 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 JKAMPQ9P055 326 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 MST1LQ2TV78 715 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 GSX1Q9H4S2 264 aaPredicted RBP10.33□□□□□ -0.76
LIN54-201ENST00000340417 CRXO43186 299 aaPredicted RBP10.33□□□□□ -0.76
LIN54-201ENST00000340417 LY6G6DO95868 133 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 GCGP01275 180 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 KRTDAPP60985 99 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 HIVEP2P31629 2446 aa10.33□□□□□ -0.76
LIN54-201ENST00000340417 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 TCTEX1D4Q5JR98 221 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 CLLU1Q5K131 121 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 LDLRAD4O15165 306 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 INSP01308 110 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 IGF2RP11717 2491 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 CLPSL1A2RUU4 121 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 Q1RN00 199 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 OR9G4Q8NGQ1 327 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 VN1R17PQ8TDU5 208 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 FBLN7Q53RD9 439 aa10.32□□□□□ -0.76
LIN54-201ENST00000340417 MMP23AO75900 390 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 APCSP02743 223 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 IGHV4-31P0DP07 118 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 CRISP2P16562 243 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 BTF3P20290 206 aaKnown RBP10.31□□□□□ -0.76
LIN54-201ENST00000340417 SULT1A2P50226 295 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 RIPPLY3P57055 190 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.31□□□□□ -0.76
LIN54-201ENST00000340417 FBLL1A6NHQ2 334 aaKnown RBP10.31□□□□□ -0.76
LIN54-201ENST00000340417 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.31□□□□□ -0.76
LIN54-201ENST00000340417 IER3P46695 156 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 SGMS2Q8NHU3 365 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 PEX7O00628 323 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 CRPP02741 224 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 TMEM95Q3KNT9 176 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 KIR2DL4Q99706 377 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 ZNF880Q6PDB4 577 aa10.31□□□□□ -0.76
LIN54-201ENST00000340417 RPL29P47914 159 aaKnown RBP10.3□□□□□ -0.76
LIN54-201ENST00000340417 H2BFSP57053 126 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 C8orf86Q6ZUL3 223 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 C9orf139Q6ZV77 190 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 MPTX1A8MV57 137 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 NDUFB8O95169 186 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 FMC1Q96HJ9 113 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 PSCAO43653 123 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 ST6GALNAC6Q969X2 333 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 ZFP36P26651 326 aaKnown RBP10.3□□□□□ -0.76
LIN54-201ENST00000340417 QRFPP83859 136 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 TBX15Q96SF7 602 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 TRGV9Q99603 122 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 Q6ZS49 121 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 OR11H6Q8NGC7 330 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 ASCL2Q99929 193 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 PRADC1Q9BSG0 188 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 KIAA2026Q5HYC2 2103 aa10.3□□□□□ -0.76
LIN54-201ENST00000340417 AANATQ16613 207 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 A0A1W2PPI3 338 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 GRIFINA4D1Z8 144 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 TRGV1A0A0A0MS02 117 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 DNAJC9-AS1A6NH13 148 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 H3BQ15 152 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 ZNF253O75346 499 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 NUDT3O95989 172 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 DIAPH2-AS1Q14236 149 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 SLC25A39Q9BZJ4 359 aaPredicted RBP10.29□□□□□ -0.76
LIN54-201ENST00000340417 LHBP01229 141 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 RPLP1P05386 114 aaKnown RBP10.29□□□□□ -0.76
LIN54-201ENST00000340417 SCRT1Q9BWW7 348 aa10.29□□□□□ -0.76
LIN54-201ENST00000340417 TOMM40O96008 361 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 CA1P00915 261 aaPredicted RBP10.28□□□□□ -0.76
LIN54-201ENST00000340417 PYYP10082 97 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 C1QL4Q86Z23 238 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 RSPO3Q9BXY4 272 aaPredicted RBP10.28□□□□□ -0.76
LIN54-201ENST00000340417 FABP5P3A8MUU1 101 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 C11orf53Q8IXP5 236 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 TMPRSS5Q9H3S3 457 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 PCDH15Q96QU1 1955 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 MUC22E2RYF6 1773 aaPredicted RBP10.28□□□□□ -0.76
LIN54-201ENST00000340417 FAM74A7A6NL05 159 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 PMS2P5A8MQ11 134 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 C9orf62Q8N4C0 152 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 MIEN1Q9BRT3 115 aa10.28□□□□□ -0.76
LIN54-201ENST00000340417 M0R2Z0 102 aa10.27□□□□□ -0.76
LIN54-201ENST00000340417 DEFB130BP0DP73 79 aa10.27□□□□□ -0.76
LIN54-201ENST00000340417 DEFB130AP0DP74 79 aa10.27□□□□□ -0.76
LIN54-201ENST00000340417 DEFB136Q30KP8 78 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms