RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 ISLRO14498 428 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 VENTXO95231 258 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 PNKDQ8N490 385 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 CHRDL1Q9BU40 450 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 TMEM191AQ9H0A3 160 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 EXPH5Q8NEV8 1989 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
USP1-201ENST00000339950 RPL27AP46776 148 aaKnown RBP9.74□□□□□ -0.85
USP1-201ENST00000339950 ACTL10Q5JWF8 245 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 IL36BQ9NZH7 164 aa9.74□□□□□ -0.85
USP1-201ENST00000339950 MPDU1O75352 247 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 MAS1LP35410 378 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 DKK4Q9UBT3 224 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 LRRK2Q5S007 2527 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 K7EN84 100 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 ZNF883P0CG24 379 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 C17orf58Q2M2W7 97 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 SPRY4Q9C004 299 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 PLSCR4Q9NRQ2 329 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 UPK2O00526 184 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 P01737 135 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 FCGR2BP31994 310 aaPredicted RBP9.73□□□□□ -0.85
USP1-201ENST00000339950 ADTRPQ96IZ2 230 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 HIGD1CA8MV81 97 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 TMEM200BQ69YZ2 307 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 RITA1Q96K30 269 aa9.73□□□□□ -0.85
USP1-201ENST00000339950 BPIFA4PQ86YQ2 179 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 TMEM116Q8NCL8 245 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 LSM4Q9Y4Z0 139 aaKnown RBP9.72□□□□□ -0.85
USP1-201ENST00000339950 PMS2P5A8MQ11 134 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 LCN2P80188 198 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 FBLN7Q53RD9 439 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 SEM1Q6ZVN7 128 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 RCHY1Q96PM5 261 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 GAFA1Q96PS6 74 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 NGBQ9NPG2 151 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 FAM215AQ9Y5M1 114 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 LRBAP50851 2863 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 C19orf67A6NJJ6 358 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 C17orf100A8MU93 164 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 KIR2DS2P43631 304 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 VDAC2P45880 294 aaPredicted RBP9.72□□□□□ -0.85
USP1-201ENST00000339950 LOXL3P58215 753 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 TP73-AS1Q9UF72 201 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 LINC00527Q9UJ94 153 aa9.72□□□□□ -0.85
USP1-201ENST00000339950 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.85
USP1-201ENST00000339950 IGKV1OR2-108A0A075B7D4 117 aa9.71□□□□□ -0.85
USP1-201ENST00000339950 NPIPB11E5RHQ5 1161 aa9.71□□□□□ -0.85
USP1-201ENST00000339950 KLRD1Q13241 179 aa9.71□□□□□ -0.85
USP1-201ENST00000339950 SPOCK3Q9BQ16 436 aa9.71□□□□□ -0.85
USP1-201ENST00000339950 TMUB1Q9BVT8 246 aa9.71□□□□□ -0.85
USP1-201ENST00000339950 TMEM144Q7Z5S9 345 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 OR4C13Q8NGP0 309 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 SRSF12Q8WXF0 261 aaKnown RBP9.71□□□□□ -0.86
USP1-201ENST00000339950 RASL11BQ9BPW5 248 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 RPUSD1Q9UJJ7 312 aaKnown RBP9.71□□□□□ -0.86
USP1-201ENST00000339950 OR4C46A6NHA9 309 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 DLL1O00548 723 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 HYPMO75409 117 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 AMY1AP04745 511 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 CT45A10P0DMU9 189 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 PPIFP30405 207 aaKnown RBP9.71□□□□□ -0.86
USP1-201ENST00000339950 PLP1P60201 277 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 ECSCRQ19T08 205 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 AMMECR1LQ6DCA0 310 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 ZFP30Q9Y2G7 519 aa9.71□□□□□ -0.86
USP1-201ENST00000339950 CCL21O00585 134 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 CD3EP07766 207 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 Q6ZWC4 215 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 NIT1Q86X76 327 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 CIARTQ8N365 385 aaPredicted RBP9.7□□□□□ -0.86
USP1-201ENST00000339950 FOXA2Q9Y261 457 aaPredicted RBP9.7□□□□□ -0.86
USP1-201ENST00000339950 A0A0G2JNJ9 132 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 M0R3E3 92 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 MPV17L2Q567V2 206 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 PRR7Q8TB68 274 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 FNDC4Q9H6D8 234 aaPredicted RBP9.7□□□□□ -0.86
USP1-201ENST00000339950 Q9UFV3 132 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 GNG7O60262 68 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 GRNP28799 593 aaKnown RBP9.7□□□□□ -0.86
USP1-201ENST00000339950 CD69Q07108 199 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 MEGF9Q9H1U4 602 aa9.7□□□□□ -0.86
USP1-201ENST00000339950 MRPL36Q9P0J6 103 aaKnown RBP9.7□□□□□ -0.86
USP1-201ENST00000339950 ASH1LQ9NR48 2969 aaKnown RBP9.69□□□□□ -0.86
USP1-201ENST00000339950 ZNF292O60281 2723 aa9.69□□□□□ -0.86
USP1-201ENST00000339950 PRSS1P07477 247 aa9.69□□□□□ -0.86
USP1-201ENST00000339950 KMT2EQ8IZD2 1858 aa9.69□□□□□ -0.86
USP1-201ENST00000339950 WT1-ASQ06250 92 aa9.69□□□□□ -0.86
USP1-201ENST00000339950 ADIPOQQ15848 244 aa9.69□□□□□ -0.86
USP1-201ENST00000339950 LOXL4Q96JB6 756 aa9.69□□□□□ -0.86
USP1-201ENST00000339950 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
USP1-201ENST00000339950 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.69□□□□□ -0.86
USP1-201ENST00000339950 PEX7O00628 323 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms