RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ZNF562Q6V9R5 426 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 FRZBQ92765 325 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 LINC00479Q96M42 142 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 OR5B12Q96R08 314 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 TBL2Q9Y4P3 447 aaKnown RBP12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 IGHV3OR16-10A0A075B7F0 116 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 OR5I1Q13606 314 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 FAM168AQ92567 244 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 ZANQ9Y493 2812 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 CENPVL3A0A0U1RRI6 287 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 C9JCJ5 164 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 AP4M1O00189 453 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 LYZP61626 148 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 Q8N9W7 124 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 RBM14Q96PK6 669 aaKnown RBP12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 USP9YO00507 2555 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 IGHV4-30-2A0A087WSY4 118 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 IGHV7-81A0A0B4J1V7 117 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 HYPMO75409 117 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 EGR2P11161 476 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 CD99P14209 185 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 C10orf105Q8TEF2 133 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 PERPQ96FX8 193 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 NBPF19A0A087WUL8 3843 aa12.81□□□□□ -0.36
SCNN1A-202ENST00000338748 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 HELTA6NFD8 242 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 H3BTX0 84 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 GGCTO75223 188 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 S100PP25815 95 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 BLNKQ8WV28 456 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 RASL11BQ9BPW5 248 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 PIMREGQ9BSJ6 248 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 IGLV11-55A0A075B6I3 123 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 NPFFO15130 113 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 TRGC1P0CF51 173 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 GP9P14770 177 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 ATP5J2P56134 94 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 PLP1P60201 277 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 ZNF329Q86UD4 541 aa12.8□□□□□ -0.36
SCNN1A-202ENST00000338748 PTPN13Q12923 2485 aa12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 SH2D7A6NKC9 451 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 SLC17A3O00476 420 aa12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 IGLV2-8P01709 118 aa12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 GNG4P50150 75 aa12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 SRD5A3Q9H8P0 318 aa12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 POLR3KQ9Y2Y1 108 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-202ENST00000338748 NPIPB5A8MRT5 1133 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 VWC2LB2RUY7 222 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 F8W735 103 aaPredicted RBP12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 FAM106CPP0CH98 169 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 NDUFA6P56556 154 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 GNG5P63218 68 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 PAX8Q06710 450 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 SRSF1Q07955 248 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 ANKRD17O75179 2603 aaKnown RBP12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 MYCNOSP40205 109 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 BCL6BQ8N143 479 aaPredicted RBP12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 ZNF843Q8N446 348 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 NHLRC2Q8NBF2 726 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 OR10G8Q8NGN5 311 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 SGMS2Q8NHU3 365 aa12.78□□□□□ -0.36
SCNN1A-202ENST00000338748 PPP5D1E7EU14 171 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 IGHV3-23P01764 117 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 RD3LP0DJH9 198 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 GFI1BQ5VTD9 330 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 BRD3OSQ6XYD6 125 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 TTC9CQ8N5M4 171 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 HIGD1AQ9Y241 93 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 LY96Q9Y6Y9 160 aa12.77□□□□□ -0.36
SCNN1A-202ENST00000338748 ABCA12Q86UK0 2595 aa12.77□□□□□ -0.37
SCNN1A-202ENST00000338748 TRAV34A0A0B4J273 112 aa12.77□□□□□ -0.37
SCNN1A-202ENST00000338748 GOSR1O95249 250 aa12.77□□□□□ -0.37
SCNN1A-202ENST00000338748 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
SCNN1A-202ENST00000338748 SLC25A39Q9BZJ4 359 aaPredicted RBP12.77□□□□□ -0.37
SCNN1A-202ENST00000338748 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 SOX21Q9Y651 276 aaPredicted RBP12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 TRAV40A0A0B4J280 105 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 PEX7O00628 323 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 PPP1R2P9O14990 202 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 NDUFB8O95169 186 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 HLA-DRB1P01911 266 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 S100A8P05109 93 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 NBEAP1P0C6P0 100 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 KCNIP4Q6PIL6 250 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 ZNF600Q6ZNG1 722 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 MRPL27Q9P0M9 148 aaKnown RBP12.76□□□□□ -0.37
SCNN1A-202ENST00000338748 OR2J3O76001 311 aa12.75□□□□□ -0.37
SCNN1A-202ENST00000338748 S100A9P06702 114 aaKnown RBP12.75□□□□□ -0.37
SCNN1A-202ENST00000338748 TMEM219Q86XT9 240 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms