RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 IGHV3-66A0A0C4DH42 116 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 PRSS46E5RG02 174 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 DFFBO76075 338 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 CFDP00746 253 aaPredicted RBP10.48□□□□□ -0.73
LIMS1-201ENST00000332345 HNRNPCP07910 306 aaKnown RBP eCLIP10.48□□□□□ -0.733e-6■□□□□ 11
LIMS1-201ENST00000332345 PVALBP20472 110 aaPredicted RBP10.48□□□□□ -0.73
LIMS1-201ENST00000332345 EIF2B2P49770 351 aaKnown RBP10.48□□□□□ -0.73
LIMS1-201ENST00000332345 OR8G2PQ6IF36 304 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 TMEM14EPQ6UXP3 125 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 LILRB2Q8N423 598 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 THAP8Q8NA92 274 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 OR10P1Q8NGE3 313 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 RABAC1Q9UI14 185 aa10.48□□□□□ -0.73
LIMS1-201ENST00000332345 COL7A1Q02388 2944 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 IGKV1D-37A0A075B6S9 117 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 DNASE2O00115 360 aaPredicted RBP10.47□□□□□ -0.73
LIMS1-201ENST00000332345 METTL15P1P0C7V9 234 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 AP2S1P53680 142 aaPredicted RBP10.47□□□□□ -0.73
LIMS1-201ENST00000332345 ZNF90Q03938 601 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 TMEM144Q7Z5S9 345 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 FAM110AQ9BQ89 295 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 RCL1Q9Y2P8 373 aaKnown RBP10.47□□□□□ -0.73
LIMS1-201ENST00000332345 LSM5Q9Y4Y9 91 aaKnown RBP10.47□□□□□ -0.73
LIMS1-201ENST00000332345 U3KQE9 123 aa10.47□□□□□ -0.73
LIMS1-201ENST00000332345 K7EPK0 472 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 P2RY1P47900 373 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 TFPI2P48307 235 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 CYCSP99999 105 aaKnown RBP10.46□□□□□ -0.73
LIMS1-201ENST00000332345 AKR1C1Q04828 323 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 USF2Q15853 346 aaPredicted RBP10.46□□□□□ -0.73
LIMS1-201ENST00000332345 GBGT1Q8N5D6 347 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 RNF125Q96EQ8 232 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 NPVFQ9HCQ7 196 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 U3KQK5 164 aa10.46□□□□□ -0.73
LIMS1-201ENST00000332345 IGKV1OR2-108A0A075B7D4 117 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 TRAV2A0A0B4J234 112 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 SMCO3A2RU48 225 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 HELTA6NFD8 242 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 FNDC10F2Z333 226 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 RLN2P04090 185 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 NUP62P37198 522 aaPredicted RBP10.45□□□□□ -0.74
LIMS1-201ENST00000332345 BCAP31P51572 246 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 DLK1P80370 383 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 IL15RAQ13261 267 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 OR2F1Q13607 317 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 HAGHQ16775 308 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 C16orf54Q6UWD8 224 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 LINC00322Q6ZN03 302 aaPredicted RBP10.45□□□□□ -0.74
LIMS1-201ENST00000332345 ACOT7LQ6ZUV0 252 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 WFDC3Q8IUB2 231 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 PBDC1Q9BVG4 233 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 GGACTQ9BVM4 153 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 MS4A6AQ9H2W1 248 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 MGAT4CQ9UBM8 478 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 UBQLN2Q9UHD9 624 aa10.45□□□□□ -0.74
LIMS1-201ENST00000332345 RBMY1BA6NDE4 496 aaKnown RBP10.44□□□□□ -0.74
LIMS1-201ENST00000332345 RBMY1EA6NEQ0 496 aaKnown RBP10.44□□□□□ -0.74
LIMS1-201ENST00000332345 GOSR2O14653 212 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 SSNA1O43805 119 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 RBMY1DP0C7P1 496 aaKnown RBP10.44□□□□□ -0.74
LIMS1-201ENST00000332345 S100A7P31151 101 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 CAV2P51636 162 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 S100A10P60903 97 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 LYZP61626 148 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 RRAS2P62070 204 aaPredicted RBP10.44□□□□□ -0.74
LIMS1-201ENST00000332345 RAB32Q13637 225 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 BPIFCQ8NFQ6 507 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 TM2D3Q9BRN9 247 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 NMES1Q9C002 83 aa10.44□□□□□ -0.74
LIMS1-201ENST00000332345 LOC102724200A0A096LPH7 203 aaPredicted RBP10.43□□□□□ -0.74
LIMS1-201ENST00000332345 BUB3O43684 328 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 DEDDO75618 318 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 PTTG1O95997 202 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 SELENOTP62341 195 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 ODF3L2Q3SX64 289 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 STXBP6Q8NFX7 210 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 PPP1R14BQ96C90 147 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 SPATA25Q9BR10 227 aa10.43□□□□□ -0.74
LIMS1-201ENST00000332345 CCNKO75909 580 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 SIX6O95475 246 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 C1orf194Q5T5A4 169 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 TEPPQ6URK8 271 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 CYP2G1PQ6ZSU1 146 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 GLMPQ8WWB7 406 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 RCHY1Q96PM5 261 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 GGTLC1Q9BX51 225 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 FBXL17Q9UF56 701 aa10.42□□□□□ -0.74
LIMS1-201ENST00000332345 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 ORM2P19652 201 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 S100A11P31949 105 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 ARL16Q0P5N6 197 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 STX12Q86Y82 276 aa10.41□□□□□ -0.74
LIMS1-201ENST00000332345 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms