RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 WNT10AQ9GZT5 417 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 PGPA6NDG6 321 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 ODF3BA8MYP8 253 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 TSTD3H0UI37 97 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 M0R1W7 72 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 CA1P00915 261 aaPredicted RBP11.57□□□□□ -0.56
TPM3-206ENST00000330188 SLC25A5P05141 298 aaKnown RBP11.57□□□□□ -0.56
TPM3-206ENST00000330188 PAX1P15863 534 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 SLC35B1P78383 322 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 ASPHD1Q5U4P2 390 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 IGFBPL1Q8WX77 278 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 FAM168AQ92567 244 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 MBD6Q96DN6 1003 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 DCHS2Q6V1P9 2916 aa11.57□□□□□ -0.56
TPM3-206ENST00000330188 LOC105371242A0A075B767 164 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 CNIH1O95406 144 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 MT-ND6P03923 174 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 ESDP10768 282 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 PSG1P11464 419 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 LEMD1Q68G75 181 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 C7orf69Q9H7B7 122 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 NAT8BQ9UHF3 227 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 LRBAP50851 2863 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 IGF2RP11717 2491 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 ZZEF1O43149 2961 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 NBR2O15453 112 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 NDUFA3O95167 84 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 PRTN3P24158 256 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 DEFA6Q01524 100 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 Q0VG73 95 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 COX19Q49B96 90 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
TPM3-206ENST00000330188 ZNF664Q8N3J9 261 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 HIGD1AQ9Y241 93 aa11.56□□□□□ -0.56
TPM3-206ENST00000330188 IZUMO1RA6ND01 250 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 GATCO43716 136 aaKnown RBP11.55□□□□□ -0.56
TPM3-206ENST00000330188 SERF1AO75920 110 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 AMY1AP04745 511 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 DDTP30046 118 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 CEACAM3P40198 252 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 LYZP61626 148 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 FBLN7Q53RD9 439 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 NUDT10Q8NFP7 164 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 NPBQ8NG41 125 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 NUDT11Q96G61 164 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 KLF12Q9Y4X4 402 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 SPTA1P02549 2419 aa11.55□□□□□ -0.56
TPM3-206ENST00000330188 TPRP12270 2363 aaKnown RBP11.54□□□□□ -0.56
TPM3-206ENST00000330188 F2Z2F3 143 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 K7EIM0 57 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 CD24P25063 80 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 RAB4BP61018 213 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 UBE2G1P62253 170 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 IQCJQ1A5X6 159 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 DTX2Q86UW9 622 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 UNQ6494/PRO21346Q6UXR6 183 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 ZNF600Q6ZNG1 722 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 GRAMD2BQ96HH9 432 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 C14orf144Q96I85 54 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 MS4A10Q96PG2 267 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 RASL11BQ9BPW5 248 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 ATG101Q9BSB4 218 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 RPH3ALQ9UNE2 315 aa11.54□□□□□ -0.56
TPM3-206ENST00000330188 HRNRQ86YZ3 2850 aaPredicted RBP11.53□□□□□ -0.56
TPM3-206ENST00000330188 A0A1W2PPR1 153 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 H3BTX0 84 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 PAFAH1B2P68402 229 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 PRR27Q6MZM9 219 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 C5orf17Q8NAS9 161 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 SMIM12Q96EX1 92 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 SGK494Q96LW2 274 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 SLC25A39Q9BZJ4 359 aaPredicted RBP11.53□□□□□ -0.56
TPM3-206ENST00000330188 Q9H3A6 140 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 TPPP2P59282 170 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 FAM103A1Q9BTL3 118 aaKnown RBP11.53□□□□□ -0.56
TPM3-206ENST00000330188 GNB4Q9HAV0 340 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 MRPL27Q9P0M9 148 aaKnown RBP11.53□□□□□ -0.56
TPM3-206ENST00000330188 TMEM14CQ9P0S9 112 aa11.53□□□□□ -0.56
TPM3-206ENST00000330188 REC114Q7Z4M0 266 aa11.52□□□□□ -0.57
TPM3-206ENST00000330188 NOL4LQ96MY1 436 aaPredicted RBP11.52□□□□□ -0.57
TPM3-206ENST00000330188 GPR82Q96P67 336 aa11.52□□□□□ -0.57
TPM3-206ENST00000330188 MLST8Q9BVC4 326 aa11.52□□□□□ -0.57
TPM3-206ENST00000330188 BMPR1BO00238 502 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 SCGB1D1O95968 90 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 TOMM40O96008 361 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 TCRAP04437 139 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 HIST1H1EP10412 219 aaKnown RBP11.51□□□□□ -0.57
TPM3-206ENST00000330188 GPR6P46095 362 aaPredicted RBP11.51□□□□□ -0.57
TPM3-206ENST00000330188 HES1Q14469 280 aa11.51□□□□□ -0.57
TPM3-206ENST00000330188 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
TPM3-206ENST00000330188 C5orf64Q2M2E5 130 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms