RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
CACNA1C-201ENST00000327702 SMIM10L1P0DMW3 83 aa8.97□□□□□ -0.97
CACNA1C-201ENST00000327702 ZNF138P52744 262 aa8.97□□□□□ -0.97
CACNA1C-201ENST00000327702 CSRP2Q16527 193 aa8.97□□□□□ -0.97
CACNA1C-201ENST00000327702 SMIM10Q96HG1 83 aa8.97□□□□□ -0.97
CACNA1C-201ENST00000327702 SPXQ9BT56 116 aa8.97□□□□□ -0.97
CACNA1C-201ENST00000327702 ZFC3H1O60293 1989 aaKnown RBP8.97□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BKO60814 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BJP06899 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BOP23527 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BBP33778 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BDP58876 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BCP62807 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 PMVKQ15126 192 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST2H2BEQ16778 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 PDE4DIPQ5VU43 2346 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BHQ93079 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BNQ99877 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 HIST1H2BMQ99879 126 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 UBL5Q9BZL1 73 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 TNFRSF14Q92956 283 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 RNF166Q96A37 237 aaPredicted RBP8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 DSCR8Q96T75 97 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 SPANXDQ9BXN6 97 aa8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 CHCHD2Q9Y6H1 151 aaPredicted RBP8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 SRRM4A7MD48 611 aaKnown RBP8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 IGFBP3P17936 291 aaPredicted RBP8.96□□□□□ -0.97
CACNA1C-201ENST00000327702 MDS2Q8NDY4 140 aa8.96□□□□□ -0.98
CACNA1C-201ENST00000327702 CCDC88CQ9P219 2028 aa8.96□□□□□ -0.98
CACNA1C-201ENST00000327702 RNF222A6NCQ9 220 aa8.96□□□□□ -0.98
CACNA1C-201ENST00000327702 SPSB3Q6PJ21 355 aa8.96□□□□□ -0.98
CACNA1C-201ENST00000327702 LY6G5BQ8NDX9 201 aa8.96□□□□□ -0.98
CACNA1C-201ENST00000327702 TMEM158Q8WZ71 300 aa8.96□□□□□ -0.98
CACNA1C-201ENST00000327702 IGLV3-21P80748 117 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 A0A0G2JMM0 328 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 A0A1W2PPB8 328 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 KIR3DP1A8MWS1 328 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 HIST1H2BLQ99880 126 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 PMS2P5A8MQ11 134 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 E9PQ18 207 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 WISP3O95389 354 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 TCF15Q12870 199 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 EXOC3-AS1Q8N2X6 119 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 UBE2E2Q96LR5 201 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 C4orf51C9J302 202 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 TMEM258P61165 79 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 HEPN1Q6WQI6 88 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 LINC00527Q9UJ94 153 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 FCN3O75636 299 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 CEACAM1P13688 526 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 TIMP3P35625 211 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 PSG3Q16557 428 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 C15orf32Q32M92 178 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 Q71RC1 249 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 C9orf106Q8NAJ2 232 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 MRPS18CQ9Y3D5 142 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 UTF1Q5T230 341 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 NEGR1Q7Z3B1 354 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 RNF114Q9Y508 228 aa8.95□□□□□ -0.98
CACNA1C-201ENST00000327702 C22orf46C9J442 243 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 C9orf139Q6ZV77 190 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 TRPT1Q86TN4 253 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 CTHRC1Q96CG8 243 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 FAM223BA6NKX1 122 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 CTSBP07858 339 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 FAM223AQ8IWN6 122 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 ZNF319Q9P2F9 582 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 CHKB-CPT1BH3BT56 60 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 RNF126Q9BV68 326 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 TMEM242Q9NWH2 141 aa8.94□□□□□ -0.98
CACNA1C-201ENST00000327702 ATRAIDQ6UW56 229 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 TMEM219Q86XT9 240 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 OTOFQ9HC10 1997 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 IGHV2-26A0A0B4J1V2 119 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 IGKV1D-13A0A0B4J2D9 117 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 TIAF1O95411 115 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 IGKV1-13P0DP09 117 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 HAMPP81172 84 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 DLEU1O43261 78 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 C14orf178Q8N769 122 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 C1orf194Q5T5A4 169 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 KLHL30-AS1Q8NEE0 82 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 TRGV9Q99603 122 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 F8VVB4 439 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 F8VWA3 439 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 TFF1P04155 84 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 SUPT4H1P63272 117 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 NDPQ00604 133 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 LCN12Q6JVE5 192 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 NINQ8N4C6 2090 aa8.93□□□□□ -0.98
CACNA1C-201ENST00000327702 IGKV1D-43A0A0B4J1Z2 117 aa8.92□□□□□ -0.98
CACNA1C-201ENST00000327702 UBE2V1Q13404 147 aa8.92□□□□□ -0.98
CACNA1C-201ENST00000327702 TAL2Q16559 108 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms