RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DPPA3Q6W0C5 159 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 RNF141Q8WVD5 230 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 VSIRQ9H7M9 311 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 GNB4Q9HAV0 340 aa7.92□□□□□ -1.14
VIPAS39-201ENST00000327028 RD3LP0DJH9 198 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 PSG1P11464 419 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 M6PRP20645 277 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 ARL3P36405 182 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 PXDC1Q5TGL8 231 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 TRBV12-3P01733 135 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 PLP1P60201 277 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 GCSAMLQ5JQS6 135 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 ZNF600Q6ZNG1 722 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 Q6ZRG5 221 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 OR51G1Q8NGK1 321 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 LRRC20Q8TCA0 184 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 WFDC12Q8WWY7 111 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 ZNF414Q96IQ9 312 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 RPRMQ9NS64 109 aa7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 PEF1Q9UBV8 284 aaKnown RBP7.91□□□□□ -1.14
VIPAS39-201ENST00000327028 ANKRD34BA5PLL1 514 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 PPP5D1E7EU14 171 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 BMPR1BO00238 502 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 OR2C1O95371 312 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 CDX1P47902 265 aaPredicted RBP7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 RELQ04864 619 aaPredicted RBP7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 OR10G4Q8NGN3 311 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 OR10G9Q8NGN4 311 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 OR10G7Q8NGN6 311 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 OR1L4Q8NGR5 311 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 Q8WTZ3 238 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 C4orf3Q8WVX3 66 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 OR5B12Q96R08 314 aa7.9□□□□□ -1.14
VIPAS39-201ENST00000327028 WI2-2373I1.2A0A1W2PRP0 233 aa7.9□□□□□ -1.15
VIPAS39-201ENST00000327028 HAX1O00165 279 aa7.9□□□□□ -1.15
VIPAS39-201ENST00000327028 COX7A2P2O60397 106 aa7.9□□□□□ -1.15
VIPAS39-201ENST00000327028 FAM213BQ8TBF2 198 aa7.9□□□□□ -1.15
VIPAS39-201ENST00000327028 C19orf24Q9BVV8 132 aa7.9□□□□□ -1.15
VIPAS39-201ENST00000327028 ZNF705EA8MWA4 302 aaPredicted RBP7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 SEC14L6B5MCN3 397 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 GGCTO75223 188 aaKnown RBP7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 CD28P10747 220 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 FHITP49789 147 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 LYZP61626 148 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 FOXL1Q12952 345 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 RNF125Q96EQ8 232 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 SAT2Q96F10 170 aaPredicted RBP7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 RCC1LQ96I51 464 aaKnown RBP7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 PFDN5Q99471 154 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 PUS1Q9Y606 427 aaKnown RBP eCLIP7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 ELOA3CA0A087WX78 387 aaPredicted RBP7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 I3L521 148 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 IL4P05112 153 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 NMBP08949 121 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 OR5G3P0C626 314 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 RAB14P61106 215 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 KHDC1LQ5JSQ8 128 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 FAM122CQ6P4D5 195 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 RPP25LQ8N5L8 163 aaKnown RBP7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 GATAD1Q8WUU5 269 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 RNF2Q99496 336 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 DOK5Q9P104 306 aa7.89□□□□□ -1.15
VIPAS39-201ENST00000327028 HYPMO75409 117 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 BLOC1S1P78537 153 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 ZNF726P1Q15940 193 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 CLLU1Q5K131 121 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 C10orf113Q5VZT2 155 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 OR1B1Q8NGR6 318 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 TMEM37Q8WXS4 190 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 ACTR3CQ9C0K3 210 aaPredicted RBP7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 ZFAND3Q9H8U3 227 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 DNAJC4Q9NNZ3 241 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 TSSC4Q9Y5U2 329 aaPredicted RBP7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 NDUFA4O00483 81 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 ORM2P19652 201 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 CDC34P49427 236 aaPredicted RBP7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 RHOBP62745 196 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 TOMM20LQ6UXN7 152 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 PATE2Q6UY27 113 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 C18orf65Q6ZTR6 163 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 KLHL30-AS1Q8NEE0 82 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 PBDC1Q9BVG4 233 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 MRPL32Q9BYC8 188 aaKnown RBP7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 SLC25A22Q9H936 323 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 HIGD1AQ9Y241 93 aa7.88□□□□□ -1.15
VIPAS39-201ENST00000327028 IGHV3-35A0A0C4DH35 117 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 HSPB1P04792 205 aaKnown RBP7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 USF2Q15853 346 aaPredicted RBP7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 SSX7Q7RTT5 188 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 C11orf44Q8N8P7 122 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 PCNPQ8WW12 178 aaKnown RBP7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 CITED2Q99967 270 aaPredicted RBP7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 MRPL27Q9P0M9 148 aaKnown RBP7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 IGHV4OR15-8A0A075B7B6 117 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 A0A087WW49 117 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 A0A1W2PPV4 95 aa7.87□□□□□ -1.15
VIPAS39-201ENST00000327028 FAM78BQ5VT40 261 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms