RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 SLC25A34Q6PIV7 304 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 OR5AN1Q8NGI8 311 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 OR4A5Q8NH83 315 aa11.79□□□□□ -0.52
SSBP3-201ENST00000326956 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-201ENST00000326956 CD24P25063 80 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 MPV17L2Q567V2 206 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 THAP8Q8NA92 274 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 C5orf17Q8NAS9 161 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
SSBP3-201ENST00000326956 VWC2LB2RUY7 222 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 INS-IGF2F8WCM5 200 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 NUDT3O95989 172 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 CCL8P80075 99 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 ZNF841Q6ZN19 808 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 LHFPL4Q7Z7J7 247 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 FMC1Q96HJ9 113 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
SSBP3-201ENST00000326956 IGKV1D-37A0A075B6S9 117 aa11.77□□□□□ -0.52
SSBP3-201ENST00000326956 hDV102S1A0JD36 115 aa11.77□□□□□ -0.52
SSBP3-201ENST00000326956 H3BTX0 84 aa11.77□□□□□ -0.52
SSBP3-201ENST00000326956 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.52
SSBP3-201ENST00000326956 SLC25A17O43808 307 aa11.77□□□□□ -0.52
SSBP3-201ENST00000326956 HCP5Q6MZN7 132 aa11.77□□□□□ -0.52
SSBP3-201ENST00000326956 RBPMS2Q6ZRY4 209 aaKnown RBP11.77□□□□□ -0.52
SSBP3-201ENST00000326956 IGHV1-24A0A0C4DH33 117 aa11.77□□□□□ -0.53
SSBP3-201ENST00000326956 IGHV2-70DA0A0C4DH43 119 aa11.77□□□□□ -0.53
SSBP3-201ENST00000326956 COL8A1P27658 744 aa11.77□□□□□ -0.53
SSBP3-201ENST00000326956 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-201ENST00000326956 SPATA12Q7Z6I5 190 aa11.77□□□□□ -0.53
SSBP3-201ENST00000326956 GSX1Q9H4S2 264 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-201ENST00000326956 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
SSBP3-201ENST00000326956 LIPFP07098 398 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 TNFRSF1AP19438 455 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 SRSF6Q13247 344 aaKnown RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 LRRC10Q5BKY1 277 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 ERASQ7Z444 233 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 LOXL4Q96JB6 756 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 MRPL36Q9P0J6 103 aaKnown RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 KLF12Q9Y4X4 402 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 ROS1P08922 2347 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 PLXNB1O43157 2135 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 MBD3L4A6NDZ8 208 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 MBD3L3A6NE82 208 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 MBD3L5A6NJ08 208 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 MYCNOSP40205 109 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 CT83Q5H943 113 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 ZCCHC24Q8N2G6 241 aaKnown RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 MBD3L2Q8NHZ7 208 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-201ENST00000326956 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 ABCA1O95477 2261 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 OR5AL1P0C617 328 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 C12orf54Q6X4T0 127 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 LINC00173Q6ZV60 143 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 TMEM186Q96B77 213 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 Q9H3A6 140 aa11.76□□□□□ -0.53
SSBP3-201ENST00000326956 DYSFO75923 2080 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 TRAV30A0A087WSZ9 112 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.75□□□□□ -0.53
SSBP3-201ENST00000326956 K7EP13 123 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 CSN3P07498 182 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 RBX1P62877 108 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 ZNF492Q9P255 531 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 HSPB8Q9UJY1 196 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 DSPP15924 2871 aaKnown RBP11.75□□□□□ -0.53
SSBP3-201ENST00000326956 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 TCRAP04437 139 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 HTR1DP28221 377 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 LINC00322Q6ZN03 302 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-201ENST00000326956 SEM1Q6ZVN7 128 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 GTSF1Q8WW33 167 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 C1RLQ9NZP8 487 aa11.75□□□□□ -0.53
SSBP3-201ENST00000326956 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-201ENST00000326956 RAI1Q7Z5J4 1906 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-201ENST00000326956 CRXO43186 299 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-201ENST00000326956 SP9P0CG40 484 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 TP73-AS1Q9UF72 201 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 LOC105371242A0A075B767 164 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 A0A1W2PPI3 338 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 CBY3A6NI87 242 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 CGB1A6NKQ9 187 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 APELAP0DMC3 54 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 DIAPH2-AS1Q14236 149 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 GFRA4Q9GZZ7 299 aa11.74□□□□□ -0.53
SSBP3-201ENST00000326956 LOC102724200A0A096LPH7 203 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-201ENST00000326956 TOX4O94842 621 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 FSTL3O95633 263 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 LTAP01374 205 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 FAM87AP0C7U9 286 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 DEFB109BQ30KR1 87 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 SAPCD1Q5SSQ6 148 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 FAM120AOSQ5T036 256 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 TMEM200BQ69YZ2 307 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 PET117Q6UWS5 81 aa11.73□□□□□ -0.53
SSBP3-201ENST00000326956 TRGV9Q99603 122 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms