RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TMEM167AQ8TBQ9 72 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 FAM168AQ92567 244 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 ASCL2Q99929 193 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 TMEM178BH3BS89 294 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 SCGB3A1Q96QR1 104 aa11.32□□□□□ -0.6
SPAST-201ENST00000315285 MBNL3Q9NUK0 354 aaKnown RBP11.32□□□□□ -0.6
SPAST-201ENST00000315285 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 LINC00469Q8N7U9 141 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 PROK2Q9HC23 129 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 MBD3L4A6NDZ8 208 aaPredicted RBP11.31□□□□□ -0.6
SPAST-201ENST00000315285 MBD3L3A6NE82 208 aaPredicted RBP11.31□□□□□ -0.6
SPAST-201ENST00000315285 MBD3L5A6NJ08 208 aaPredicted RBP11.31□□□□□ -0.6
SPAST-201ENST00000315285 UBE2L6O14933 153 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 IGHV3-11P01762 117 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 RHOGP84095 191 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 TEX29Q8N6K0 151 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 MBD3L2Q8NHZ7 208 aaPredicted RBP11.31□□□□□ -0.6
SPAST-201ENST00000315285 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
SPAST-201ENST00000315285 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 THBDP07204 575 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 GAFA1Q96PS6 74 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
SPAST-201ENST00000315285 ABCA1O95477 2261 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 ZNF672Q499Z4 452 aaPredicted RBP11.3□□□□□ -0.6
SPAST-201ENST00000315285 ACTL10Q5JWF8 245 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 NIT1Q86X76 327 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 LIME1Q9H400 295 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 PSG1P11464 419 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 SPACA3Q8IXA5 215 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 H0YJW9 148 aa11.3□□□□□ -0.6
SPAST-201ENST00000315285 GEMIN7Q9H840 131 aaKnown RBP11.3□□□□□ -0.6
SPAST-201ENST00000315285 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
SPAST-201ENST00000315285 LY6G6EA0A0G2JKS1 128 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 U3KQA8 63 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 LEPP41159 167 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 SRSF6Q13247 344 aaKnown RBP11.29□□□□□ -0.6
SPAST-201ENST00000315285 FAM71F2Q6NXP2 309 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 TMEM50AO95807 157 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 HBDP02042 147 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 IGHV1-3A0A0C4DH29 117 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.29□□□□□ -0.6
SPAST-201ENST00000315285 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
SPAST-201ENST00000315285 OR5AN1Q8NGI8 311 aa11.29□□□□□ -0.6
SPAST-201ENST00000315285 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
SPAST-201ENST00000315285 H7C1H1 209 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
SPAST-201ENST00000315285 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
SPAST-201ENST00000315285 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 TRGV9Q99603 122 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 TNFSF13O75888 250 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 NUP37Q8NFH4 326 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 PCP4P48539 62 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 KIR3DL3Q8N743 410 aa11.28□□□□□ -0.6
SPAST-201ENST00000315285 A0A1B0GWJ7 208 aa11.27□□□□□ -0.6
SPAST-201ENST00000315285 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.6
SPAST-201ENST00000315285 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.6
SPAST-201ENST00000315285 CACNA1BQ00975 2339 aa11.27□□□□□ -0.6
SPAST-201ENST00000315285 PPBPP02775 128 aa11.27□□□□□ -0.6
SPAST-201ENST00000315285 TCRAP04437 139 aa11.27□□□□□ -0.6
SPAST-201ENST00000315285 GZMBP10144 247 aa11.27□□□□□ -0.6
SPAST-201ENST00000315285 FRMPD3Q5JV73 1810 aa11.27□□□□□ -0.61
SPAST-201ENST00000315285 PRB4P10163 310 aaPredicted RBP11.27□□□□□ -0.61
SPAST-201ENST00000315285 PAX1P15863 534 aa11.27□□□□□ -0.61
SPAST-201ENST00000315285 PAX9P55771 341 aa11.27□□□□□ -0.61
SPAST-201ENST00000315285 FAM169BQ8N8A8 192 aa11.27□□□□□ -0.61
SPAST-201ENST00000315285 WIPF3A6NGB9 483 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 HAX1O00165 279 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 WNT2P09544 360 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
SPAST-201ENST00000315285 CADP27708 2225 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 CREBBPQ92793 2442 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 A0A0G2JNJ9 132 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 NXT2Q9NPJ8 142 aaKnown RBP11.26□□□□□ -0.61
SPAST-201ENST00000315285 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
SPAST-201ENST00000315285 Q9UFV3 132 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 TANC1Q9C0D5 1861 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 NPFFO15130 113 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
SPAST-201ENST00000315285 LMO1P25800 156 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 TNFRSF18Q9Y5U5 241 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 USF3Q68DE3 2245 aa11.26□□□□□ -0.61
SPAST-201ENST00000315285 NPIPB5A8MRT5 1133 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 NDUFA3O95167 84 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 C1orf194Q5T5A4 169 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 RNF5Q99942 180 aa11.25□□□□□ -0.61
SPAST-201ENST00000315285 CACNG7P62955 275 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms