RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 TMED3Q9Y3Q3 217 aa9.31□□□□□ -0.92
CKS2-201ENST00000314355 FAM90A26D6RGX4 464 aa9.3□□□□□ -0.92
CKS2-201ENST00000314355 CFDP00746 253 aaPredicted RBP9.3□□□□□ -0.92
CKS2-201ENST00000314355 PSG1P11464 419 aa9.3□□□□□ -0.92
CKS2-201ENST00000314355 SLC25A6P12236 298 aa9.3□□□□□ -0.92
CKS2-201ENST00000314355 MIFP14174 115 aa9.3□□□□□ -0.92
CKS2-201ENST00000314355 DCANP1Q8TF63 244 aa9.3□□□□□ -0.92
CKS2-201ENST00000314355 NRN1Q9NPD7 142 aa9.3□□□□□ -0.92
CKS2-201ENST00000314355 U3KQE9 123 aa9.3□□□□□ -0.92
CKS2-201ENST00000314355 KNCNA6PVL3 124 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 CENPXA8MT69 81 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 C11orf94C9JXX5 98 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 BUB3O43684 328 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 TCTAP57738 103 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 SUPT4H1P63272 117 aaKnown RBP9.29□□□□□ -0.92
CKS2-201ENST00000314355 USF2Q15853 346 aaPredicted RBP9.29□□□□□ -0.92
CKS2-201ENST00000314355 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
CKS2-201ENST00000314355 GGNBP1Q5YKI7 109 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 TRIQKQ629K1 86 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 OR8G2PQ6IF36 304 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
CKS2-201ENST00000314355 FAM24BQ8N5W8 94 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 RNF125Q96EQ8 232 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 RAB40CQ96S21 281 aa9.29□□□□□ -0.92
CKS2-201ENST00000314355 NAP1L6A6NFF2 107 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 WRBO00258 174 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 SFT2D2O95562 160 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 IFNA21P01568 189 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 NANOS2P60321 138 aaKnown RBP9.28□□□□□ -0.92
CKS2-201ENST00000314355 LYZP61626 148 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 EWSR1Q01844 656 aaKnown RBP eCLIP9.28□□□□□ -0.92
CKS2-201ENST00000314355 GAMTQ14353 236 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 LRTM2Q8N967 370 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 GLMPQ8WWB7 406 aa9.28□□□□□ -0.92
CKS2-201ENST00000314355 DEFB4AO15263 64 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 SYNGR2O43760 224 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 HOXB5P09067 269 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 IAPPP10997 89 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 SAMD13Q5VXD3 122 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 S100A7AQ86SG5 101 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 COQ8AQ8NI60 647 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 TMEM170AQ8WVE7 144 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 TBC1D24Q9ULP9 559 aa9.27□□□□□ -0.93
CKS2-201ENST00000314355 NKX2-1P43699 371 aaPredicted RBP9.26□□□□□ -0.93
CKS2-201ENST00000314355 UBE2MP61081 183 aaKnown RBP9.26□□□□□ -0.93
CKS2-201ENST00000314355 C1orf194Q5T5A4 169 aa9.26□□□□□ -0.93
CKS2-201ENST00000314355 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
CKS2-201ENST00000314355 LINC00052Q96N35 136 aa9.26□□□□□ -0.93
CKS2-201ENST00000314355 TRGV9Q99603 122 aa9.26□□□□□ -0.93
CKS2-201ENST00000314355 HRH4Q9H3N8 390 aa9.26□□□□□ -0.93
CKS2-201ENST00000314355 STRAPQ9Y3F4 350 aaKnown RBP9.26□□□□□ -0.93
CKS2-201ENST00000314355 V9GYH0 126 aa9.26□□□□□ -0.93
CKS2-201ENST00000314355 ZNF701M0R085 212 aaPredicted RBP9.25□□□□□ -0.93
CKS2-201ENST00000314355 PITX3O75364 302 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 GALR1P47211 349 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 ZNF90Q03938 601 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 PPP1R1AQ13522 171 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 OR2F1Q13607 317 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 CNPY1Q3B7I2 92 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 SPANXN5Q5MJ07 72 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 EBLN2Q6P2I7 272 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 CCDC190Q86UF4 302 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 BPIFCQ8NFQ6 507 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 TRIM63Q969Q1 353 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 CLEC5AQ9NY25 188 aa9.25□□□□□ -0.93
CKS2-201ENST00000314355 IGHV4-28A0A0C4DH34 117 aa9.24□□□□□ -0.93
CKS2-201ENST00000314355 IGLL5B9A064 214 aa9.24□□□□□ -0.93
CKS2-201ENST00000314355 MEOX2P50222 304 aa9.24□□□□□ -0.93
CKS2-201ENST00000314355 AKR1C1Q04828 323 aa9.24□□□□□ -0.93
CKS2-201ENST00000314355 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
CKS2-201ENST00000314355 MAGT1Q9H0U3 335 aa9.24□□□□□ -0.93
CKS2-201ENST00000314355 TRAV10A0A0B4J240 114 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 SMCO3A2RU48 225 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 ZNF705EA8MWA4 302 aaPredicted RBP9.23□□□□□ -0.93
CKS2-201ENST00000314355 H3BMM0 161 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 PSMB3P49720 205 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 ZNF79Q15937 498 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 C4orf46Q504U0 113 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 OR4B1Q8NGF8 309 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 C16orf92Q96LL3 132 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 GPR82Q96P67 336 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 C7orf50Q9BRJ6 194 aaKnown RBP9.23□□□□□ -0.93
CKS2-201ENST00000314355 TMEM147Q9BVK8 224 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 PSENENQ9NZ42 101 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 SLC45A2Q9UMX9 530 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 RNF24Q9Y225 148 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 DNAH7Q8WXX0 4024 aa9.23□□□□□ -0.93
CKS2-201ENST00000314355 C9orf170A2RU37 121 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 TMEM189A5PLL7 270 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 ORM2P19652 201 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 HLA-DMBP28068 263 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 RAP2BP61225 183 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 FOXI2Q6ZQN5 318 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 Q8NAQ8 132 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 SLC25A22Q9H936 323 aa9.22□□□□□ -0.93
CKS2-201ENST00000314355 RPRMQ9NS64 109 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms