RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ST20Q9HBF5 79 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 IL36RNQ9UBH0 155 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 MRPS16Q9Y3D3 137 aaKnown RBP4.93□□□□□ -1.62
SEC22A-201ENST00000309934 OTOGLQ3ZCN5 2332 aa4.93□□□□□ -1.62
SEC22A-201ENST00000309934 IGKV1D-8A0A087WSZ0 117 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TMEM262E9PQX1 116 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 CXorf1O96002 111 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 ATP6V0CP27449 155 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 PSG3Q16557 428 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TMEM200BQ69YZ2 307 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TMEM136Q6ZRR5 245 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TCF24Q7RTU0 167 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 RPRMLQ8N4K4 120 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TRBV20-1A0A075B6N2 111 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 SAA2-SAA4A0A096LPE2 208 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 IGKV1D-13A0A0B4J2D9 117 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 KIR2DL5BA0A0G2JN68 375 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 KIR2DL5BA0A0G2JPC4 375 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 PSMB11A5LHX3 300 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 C15orf65H3BRN8 121 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 CST7O76096 145 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 SAA2P0DJI9 122 aaPredicted RBP4.92□□□□□ -1.62
SEC22A-201ENST00000309934 IGKV1-13P0DP09 117 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 GCSHP23434 173 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 CSN1S1P47710 185 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 PRCDQ00LT1 54 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 PRR31Q5SQ13 230 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 ADAMTSL5Q6ZMM2 481 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 ZNF833PQ6ZTB9 187 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 KIR2DL5AQ8N109 375 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TRANK1O15050 2925 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TRAV14DV4A0A0A6YYC5 116 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 OPRK1P41145 380 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 C9orf153Q5TBE3 101 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 OR10G9Q8NGN4 311 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 OR10G7Q8NGN6 311 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TAF15Q92804 592 aaKnown RBP eCLIP4.92□□□□□ -1.62
SEC22A-201ENST00000309934 MAP1LC3CQ9BXW4 147 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 NRN1Q9NPD7 142 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TMEM160Q9NX00 188 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 MUC21A0A0G2JKD1 596 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 A0A0G2JLM5 398 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 MUC21A0A140T8X8 626 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 B4DSR2 109 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 FGF16O43320 207 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 CD5LO43866 347 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 SPINK4O60575 86 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 C1QL1O75973 258 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 DANCRP0C864 163 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 SMIM13P0DJ93 91 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 MUC21Q5SSG8 566 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 PQLC2Q6ZP29 291 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 TPRX1Q8N7U7 411 aa4.92□□□□□ -1.62
SEC22A-201ENST00000309934 ITLN2Q8WWU7 325 aaPredicted RBP4.92□□□□□ -1.62
SEC22A-201ENST00000309934 IGHV2-26A0A0B4J1V2 119 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 NCBP2LA6PVI3 153 aaKnown RBP4.91□□□□□ -1.62
SEC22A-201ENST00000309934 HAX1O00165 279 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 HYPMO75409 117 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 MMP23AO75900 390 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 GNB1P62873 340 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 TMEM170AQ8WVE7 144 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 HILPDAQ9Y5L2 63 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 A0A1B0GW64 132 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 FAM231BA6NCW3 169 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 SLC35B1P78383 322 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 C2orf83Q53S99 150 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 ZNF841Q6ZN19 808 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 UBALD1Q8TB05 177 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 NDFIP1Q9BT67 221 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 RNF126Q9BV68 326 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 IFI27L2Q9H2X8 130 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 TEX48A0A1B0GUV7 120 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 SNURFLB1AK76 121 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 J3KT08 172 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 TOMM40O96008 361 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 HSPB1P04792 205 aaKnown RBP4.91□□□□□ -1.62
SEC22A-201ENST00000309934 SEC11AP67812 179 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 ETDBQ3ZM63 59 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 CXorf66Q5JRM2 361 aaPredicted RBP4.91□□□□□ -1.62
SEC22A-201ENST00000309934 LRRC75A-AS1Q8N1F1 130 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 OR4F17Q8NGA8 305 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 GATAD1Q8WUU5 269 aa4.91□□□□□ -1.62
SEC22A-201ENST00000309934 NBR2O15453 112 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 GPR183P32249 361 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 CAMPP49913 170 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 ACSM6Q6P461 480 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 FGF23Q9GZV9 251 aaPredicted RBP4.9□□□□□ -1.62
SEC22A-201ENST00000309934 TRAV9-2A0A087WT02 112 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 TRAV1-1A0A0B4J248 108 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 LOC107984156A0A0G2JMH3 177 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 WIPF3A6NGB9 483 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 SMIM9A6NGZ8 99 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 ZNHIT1O43257 154 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 TSPAN13O95857 204 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 IGFBP2P18065 325 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 UBE2E1P51965 193 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 C17orf58Q2M2W7 97 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 RNF144BQ7Z419 303 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 ARL17AQ8IVW1 177 aa4.9□□□□□ -1.62
SEC22A-201ENST00000309934 SGMS2Q8NHU3 365 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms