RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TRAV12-1A0A0B4J245 112 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP38-201ENST00000307017 LYZL1Q6UWQ5 148 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 Q71RC1 249 aaPredicted RBP10.47□□□□□ -0.73
USP38-201ENST00000307017 TRAV9-2A0A087WT02 112 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 RAB9AP51151 201 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 PAQR4Q8N4S7 273 aaPredicted RBP10.47□□□□□ -0.73
USP38-201ENST00000307017 MDS2Q8NDY4 140 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 COL11A2P13942 1736 aaPredicted RBP10.47□□□□□ -0.73
USP38-201ENST00000307017 HEPN1Q6WQI6 88 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 ZNF703Q9H7S9 590 aaPredicted RBP10.47□□□□□ -0.73
USP38-201ENST00000307017 IGKV1-9A0A0C4DH69 117 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 K7EMI3 77 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 TRAV13-1A0A0B4J241 112 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 TIMM23O14925 209 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 FCN3O75636 299 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 ERVK11-1P61568 191 aa10.47□□□□□ -0.73
USP38-201ENST00000307017 MBNL3Q9NUK0 354 aaKnown RBP10.47□□□□□ -0.73
USP38-201ENST00000307017 A0A096LPF7 62 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 F8VVB4 439 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 F8VWA3 439 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 SMIM10L1P0DMW3 83 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 MORN2Q502X0 79 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 ZFAND6Q6FIF0 208 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 SMIM10Q96HG1 83 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 TRAV26-2A0A0B4J265 109 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 A8MWV9 139 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 ATP5L2Q7Z4Y8 100 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 SPRR3Q9UBC9 169 aa10.46□□□□□ -0.73
USP38-201ENST00000307017 RNASE13Q5GAN3 156 aaKnown RBP10.46□□□□□ -0.74
USP38-201ENST00000307017 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.74
USP38-201ENST00000307017 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.74
USP38-201ENST00000307017 RNF125Q96EQ8 232 aa10.46□□□□□ -0.74
USP38-201ENST00000307017 C8orf49Q96NF6 230 aa10.46□□□□□ -0.74
USP38-201ENST00000307017 TCRBV4S1A1TA0A5B7 111 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 IFI27L1Q96BM0 104 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 DPM3Q9P2X0 92 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 GGTLC3B5MD39 225 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 UBE2CO00762 179 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 EIF4EBP2Q13542 120 aaPredicted RBP10.45□□□□□ -0.74
USP38-201ENST00000307017 CLPSL2Q6UWE3 100 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 Q6ZT83 130 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 MGST2Q99735 147 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 ERG28Q9UKR5 140 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 C14orf178Q8N769 122 aaPredicted RBP10.45□□□□□ -0.74
USP38-201ENST00000307017 FAM181AQ8N9Y4 354 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 LOC285556D6RIA3 1793 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 SIGLEC15Q6ZMC9 328 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 OTORQ9NRC9 128 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 LRRK1Q38SD2 2015 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 EREGO14944 169 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 NUTF2P61970 127 aaKnown RBP10.45□□□□□ -0.74
USP38-201ENST00000307017 NEGR1Q7Z3B1 354 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 MED12Q93074 2177 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 STRCP1A6NGW2 1772 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
USP38-201ENST00000307017 COL4A5P29400 1685 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 SEC16AO15027 2179 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 SAXO1Q8IYX7 474 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 PARP14Q460N5 1801 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 DOCK6Q96HP0 2047 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
USP38-201ENST00000307017 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 CTHRC1Q96CG8 243 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 SAP30O75446 220 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 TM2D1Q9BX74 207 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 LAGE3Q14657 143 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 ADAMTSL5Q6ZMM2 481 aa10.44□□□□□ -0.74
USP38-201ENST00000307017 IGHV3-38A0A0C4DH36 116 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 ESDP10768 282 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 KIR3DS1Q14943 382 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 C2orf82Q6UX34 121 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 C15orf61A6NNL5 157 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 H7C1H1 209 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 UPK2O00526 184 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 TOMM40O96008 361 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 VMO1Q7Z5L0 202 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 PTPRZ1P23471 2315 aaPredicted RBP10.43□□□□□ -0.74
USP38-201ENST00000307017 TCF15Q12870 199 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 NUP35Q8NFH5 326 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 SCN5AQ14524 2016 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 NBR2O15453 112 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 SH2D1AO60880 128 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 C9JAW5 83 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 RCHY1Q96PM5 261 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 A0A1B0GTI1 187 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 WIPF3A6NGB9 483 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 ZNF497Q6ZNH5 498 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
USP38-201ENST00000307017 IGKV1-27A0A075B6S5 117 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 SPRY2O43597 315 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 CSTL1Q9H114 145 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 B9A039 149 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 TMEM158Q8WZ71 300 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 DOCK10Q96BY6 2186 aa10.42□□□□□ -0.74
USP38-201ENST00000307017 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms