RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 IFI27L2Q9H2X8 130 aa6.95□□□□□ -1.3
PCDHB1-201ENST00000306549 F12P00748 615 aaPredicted RBP6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 IGHV3-11P01762 117 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 ORMDL3Q8N138 153 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 PVRIGQ6DKI7 326 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 BIVMQ86UB2 503 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 PEF1Q9UBV8 284 aaKnown RBP6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 LY6G6EA0A0G2JKS1 128 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 RUNX1Q01196 453 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 FOXB2Q5VYV0 432 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 IGFL2Q6UWQ7 119 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 U3KQA8 63 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 TMEM178BH3BS89 294 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 GPR146Q96CH1 333 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 USMG5Q96IX5 58 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 FABP5P3A8MUU1 101 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 TMEM50AO95807 157 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 GCHFRP30047 84 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 SRSF6Q13247 344 aaKnown RBP6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 SP5Q6BEB4 398 aaPredicted RBP6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 NCOR1P1Q9H4R4 102 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 ABCA12Q86UK0 2595 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 CENPWQ5EE01 88 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 MRPL20Q9BYC9 149 aaKnown RBP6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 CYSLTR1Q9Y271 337 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 OVOL1O14753 267 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNRF1Q8ND25 227 aa6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 SEPSECSQ9HD40 501 aaKnown RBP6.94□□□□□ -1.3
PCDHB1-201ENST00000306549 CEP295Q9C0D2 2601 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 KIAA1644Q3SXP7 199 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNF497Q6ZNH5 498 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 OR1P1Q8NH06 330 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 TRGC2P03986 189 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 SEC11AP67812 179 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 EFNB3Q15768 340 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 HEPN1Q6WQI6 88 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 RCC1P18754 421 aaPredicted RBP6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 LINC00158P58513 81 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 CD28P10747 220 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 TRAF4Q9BUZ4 470 aaPredicted RBP6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 PARD6GQ9BYG4 376 aaPredicted RBP6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 H3BTX0 84 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 CDKN1AP38936 164 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 Q0VFX4 171 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 C18orf15Q96N68 181 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 CRIM1Q9NZV1 1036 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 IGKV3D-20A0A0C4DH25 116 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 TOMM40O96008 361 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 GATA4P43694 442 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 ORMDL2Q53FV1 153 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 SPSB3Q6PJ21 355 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 OR52E5Q8NH55 327 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNF257Q9Y2Q1 563 aa6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 MUC22E2RYF6 1773 aaPredicted RBP6.93□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNF462Q96JM2 2506 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 UPK2O00526 184 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 WISP1O95388 367 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 RPL36AP83881 106 aaKnown RBP6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 RPL36ALQ969Q0 106 aaKnown RBP6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 RMI2Q96E14 147 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 A0A0G2JK05 382 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 A0A1B0GUS0 222 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 MSGN1A6NI15 193 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 DRAM1Q8N682 238 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 NPDC1Q9NQX5 325 aaPredicted RBP6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 TRAV9-2A0A087WT02 112 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 ITGB1BP1O14713 200 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 VENTXO95231 258 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 SRSF1Q07955 248 aaKnown RBP eCLIP6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNF362Q5T0B9 420 aaPredicted RBP6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 IGHV1-46P01743 117 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 OTORQ9NRC9 128 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 LHBP01229 141 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 PAX8Q06710 450 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 ASPHD2Q6ICH7 369 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 SLX1AQ9BQ83 275 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 ANAPC10Q9UM13 185 aa6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 RPP21Q9H633 154 aaKnown RBP6.92□□□□□ -1.3
PCDHB1-201ENST00000306549 A0A1B0GWB2 263 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 OTX1P32242 354 aaPredicted RBP6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 A0A1B0GV72 72 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 PPBPP02775 128 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 RHOGP84095 191 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 FOXF2Q12947 444 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 TRAV40A0A0B4J280 105 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 C15orf61A6NNL5 157 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 IGHV3-48P01763 117 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 APOHP02749 345 aaPredicted RBP6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 LGALS1P09382 135 aaKnown RBP6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 TEX38Q6PEX7 206 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 CBLN2Q8IUK8 224 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNF585BQ52M93 769 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 RAMP1O60894 148 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 NDUFA3O95167 84 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 EFNB1P98172 346 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 ZNF660Q6AZW8 331 aaPredicted RBP6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
PCDHB1-201ENST00000306549 TRAV12-3A0A0B4J271 114 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms