RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 UBE2V1Q13404 147 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 OCC1Q8TAD7 63 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 GVINP1Q7Z2Y8 2422 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 ZGRF1Q86YA3 2104 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 GZMBP10144 247 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 CMC4P56277 68 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-201ENST00000302516 WDR83OSQ9Y284 106 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 NCOR1P1Q9H4R4 102 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 H0YIZ8 118 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 SNAI2O43623 268 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 NDUFS6O75380 124 aaKnown RBP6.36□□□□□ -1.39
SF3B3-201ENST00000302516 LYPD3O95274 346 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 FBXL15Q9H469 300 aa6.36□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV1D-13A0A0B4J2D9 117 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV1-13P0DP09 117 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 LHX2P50458 406 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 SSBP2P81877 361 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-201ENST00000302516 WBP1Q96G27 269 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 GTF3C1Q12789 2109 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 CENPVQ7Z7K6 275 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-201ENST00000302516 BOD1L2Q8IYS8 172 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 PSG8Q9UQ74 426 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 NEUROG3Q9Y4Z2 214 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 LDLRAD4O15165 306 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 CD7P09564 240 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 SIGLEC15Q6ZMC9 328 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 SRSF8Q9BRL6 282 aaKnown RBP6.35□□□□□ -1.39
SF3B3-201ENST00000302516 TREML4Q6UXN2 200 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 GFI1Q99684 422 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 PATE3B3GLJ2 98 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 PF4P02776 101 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 ACACAQ13085 2346 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 SPAARA0A1B0GVQ0 90 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 CXCL1P09341 107 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 RIPPLY3P57055 190 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 PLAURQ03405 335 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 PSG7Q13046 419 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 C17orf100A8MU93 164 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 LINC01587Q99440 93 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 CYTL1Q9NRR1 136 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 A0A0A6YYD4 124 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 NMSQ5H8A3 153 aa6.35□□□□□ -1.39
SF3B3-201ENST00000302516 A0A1W2PR77 199 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 TDGF1P13385 188 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 SPSB3Q6PJ21 355 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 LYZL4Q96KX0 146 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 ATXN7O15265 892 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-201ENST00000302516 IGHV3-48P01763 117 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 PDE6HQ13956 83 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 TMEM14EPQ6UXP3 125 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 SHANK1Q9Y566 2161 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 IMMP1LQ96LU5 166 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV1-9A0A0C4DH69 117 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 OOSP1A8MZH6 123 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 SYS1-DBNDD2H3BUS1 97 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 IGHV1-2P23083 117 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 GAS1P54826 345 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 ST6GALNAC3Q8NDV1 305 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 GGTLC1Q9BX51 225 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV1D-43A0A0B4J1Z2 117 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 PAQR4Q8N4S7 273 aaPredicted RBP6.34□□□□□ -1.39
SF3B3-201ENST00000302516 NPFFR1Q9GZQ6 430 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 TFF2Q03403 129 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 CLEC19AQ6UXS0 136 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 PCNX1Q96RV3 2341 aa6.34□□□□□ -1.39
SF3B3-201ENST00000302516 IGKV3OR2-268A0A0C4DH90 116 aa6.34□□□□□ -1.4
SF3B3-201ENST00000302516 CRYGSP22914 178 aa6.34□□□□□ -1.4
SF3B3-201ENST00000302516 LY6EQ16553 131 aa6.34□□□□□ -1.4
SF3B3-201ENST00000302516 TRBV7-1A0A0A6YYK4 115 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 RFPL3SP0C7P2 107 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 SUPT4H1P63272 117 aaKnown RBP6.33□□□□□ -1.4
SF3B3-201ENST00000302516 NAPSAO96009 420 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 OR9G9P0C7N8 305 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 FAM168AQ92567 244 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 MESP2Q0VG99 397 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 FAM216BQ8N7L0 139 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 C20orf144Q9BQM9 153 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 MBNL3Q9NUK0 354 aaKnown RBP6.33□□□□□ -1.4
SF3B3-201ENST00000302516 A0A0G2JMM0 328 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 A0A1W2PPB8 328 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 FAM231BA6NCW3 169 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 KIR3DP1A8MWS1 328 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 LEPROTO15243 131 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 VDAC2P45880 294 aaPredicted RBP6.33□□□□□ -1.4
SF3B3-201ENST00000302516 HCFC1P51610 2035 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 TRAV2A0A0B4J234 112 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 TRAV5A0A0B4J249 113 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 CFHR1Q03591 330 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 NEGR1Q7Z3B1 354 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 LOC102723996A0A087X1L8 192 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 GFRA3O60609 400 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 COX11Q9Y6N1 276 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 CD5LO43866 347 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 Q0VG73 95 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 GAGE1Q13065 139 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 GFI1BQ5VTD9 330 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 DNAJC30Q96LL9 226 aa6.33□□□□□ -1.4
SF3B3-201ENST00000302516 D6R8Y8 96 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 GUSBP1Q15486 140 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 TRGV2A0A075B6R0 118 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms