RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 IGHV1-46P01743 117 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 TMEM144Q7Z5S9 345 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 ORAOV1Q8WV07 137 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 TXNDC17Q9BRA2 123 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 CGB1A6NKQ9 187 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 HLA-DQA1P01909 254 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 DAZAP2Q15038 168 aaPredicted RBP11.5□□□□□ -0.57
SDC2-201ENST00000302190 C16orf54Q6UWD8 224 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 OR4F17Q8NGA8 305 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 GP6Q9HCN6 339 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 GNG7O60262 68 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 FBLN7Q53RD9 439 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 LINC01560Q8TB33 94 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 TRAV8-1A0A0A6YYK1 113 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 NPIPB11E5RHQ5 1161 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 IGKV3-15P01624 115 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 NBEAP1P0C6P0 100 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 ZNF474Q6S9Z5 364 aaPredicted RBP11.5□□□□□ -0.57
SDC2-201ENST00000302190 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
SDC2-201ENST00000302190 UPK2O00526 184 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 SRSF12Q8WXF0 261 aaKnown RBP11.49□□□□□ -0.57
SDC2-201ENST00000302190 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 LRBAP50851 2863 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 AMY1AP04745 511 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 C11orf53Q8IXP5 236 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 LY6HO94772 140 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 SLC25A33Q9BSK2 321 aa11.49□□□□□ -0.57
SDC2-201ENST00000302190 TRBV20OR9-2A0A075B6H5 130 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 MT-ND6P03923 174 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
SDC2-201ENST00000302190 K7ERU9 68 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 PRRX1P54821 245 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 WFDC3Q8IUB2 231 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 TMUB1Q9BVT8 246 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 IGHV3-49A0A0A0MS15 119 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 PEX7O00628 323 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 ISLRO14498 428 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 ZNF138P52744 262 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 SLC25A15Q9Y619 301 aa11.48□□□□□ -0.57
SDC2-201ENST00000302190 ZNF785A8K8V0 405 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 CD3EP07766 207 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 CD99P14209 185 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 UQCRFS1P47985 274 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 DIAPH2-AS1Q14236 149 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 KRTAP27-1Q3LI81 207 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 IGFBPL1Q8WX77 278 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 AAMDCQ9H7C9 122 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 A8MWL6 223 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 OR2J3O76001 311 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 FAM87AP0C7U9 286 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 CD69Q07108 199 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 CLEC3BP05452 202 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 RIPPLY3P57055 190 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 ABHD17AQ96GS6 310 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 TIMD4Q96H15 378 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 HIGD1AQ9Y241 93 aa11.47□□□□□ -0.57
SDC2-201ENST00000302190 K7EP13 123 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 LEPROTL1O95214 131 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 ORM1P02763 201 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 FOXL1Q12952 345 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 SCGB2A2Q13296 93 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.57
SDC2-201ENST00000302190 PNKDQ8N490 385 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 NEUROG1Q92886 237 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.57
SDC2-201ENST00000302190 OR8B3Q8NGG8 313 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 OR52E5Q8NH55 327 aa11.46□□□□□ -0.57
SDC2-201ENST00000302190 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.57
SDC2-201ENST00000302190 HCFC1P51610 2035 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 PDLIM4P50479 330 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 PRCDQ00LT1 54 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 TBR1Q16650 682 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 LYPD2Q6UXB3 125 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 C1orf162Q8NEQ5 155 aaPredicted RBP11.46□□□□□ -0.58
SDC2-201ENST00000302190 CSTL1Q9H114 145 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 PLSCR4Q9NRQ2 329 aa11.46□□□□□ -0.58
SDC2-201ENST00000302190 SH2D7A6NKC9 451 aaPredicted RBP11.45□□□□□ -0.58
SDC2-201ENST00000302190 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 Q6ZWC4 215 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 KIAA1549Q9HCM3 1950 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 C17orf100A8MU93 164 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 BRWD1-AS2P59051 145 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 PRR7Q8TB68 274 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
SDC2-201ENST00000302190 USP9YO00507 2555 aaPredicted RBP11.45□□□□□ -0.58
SDC2-201ENST00000302190 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 IL4P05112 153 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 VDAC2P45880 294 aaPredicted RBP11.44□□□□□ -0.58
SDC2-201ENST00000302190 OCIAD2Q56VL3 154 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 PROP1O75360 226 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 FXYD7P58549 80 aa11.44□□□□□ -0.58
SDC2-201ENST00000302190 ECSCRQ19T08 205 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms