RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ITLN1Q8WWA0 313 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 SPOCK3Q9BQ16 436 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 CHTOPQ9Y3Y2 248 aaKnown RBP8.78□□□□□ -1
ZNF558-201ENST00000301475 SRRM5B3KS81 715 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 G3V4G9 280 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 CSN3P07498 182 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 OR5AL1P0C617 328 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 FGF6P10767 208 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 TMEM177Q53S58 311 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 SPRNQ5BIV9 151 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 BPIFA4PQ86YQ2 179 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 SPRR3Q9UBC9 169 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 EPDR1Q9UM22 224 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 C19orf71A6NCJ1 209 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 APOA2P02652 100 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 SLC25A5P05141 298 aaKnown RBP8.78□□□□□ -1
ZNF558-201ENST00000301475 MEOX1P50221 254 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 SEC11AP67812 179 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 GCSAMQ8N6F7 178 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 BLNKQ8WV28 456 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 NEU4Q8WWR8 484 aaPredicted RBP8.78□□□□□ -1
ZNF558-201ENST00000301475 GPR82Q96P67 336 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 DEFB127Q9H1M4 99 aa8.78□□□□□ -1
ZNF558-201ENST00000301475 A8MWL6 223 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 E7EUB6 86 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 KLK10O43240 276 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 SAA1P0DJI8 122 aaPredicted RBP8.77□□□□□ -1.01
ZNF558-201ENST00000301475 PAX2Q02962 417 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 DUX4L9Q6RFH8 374 aaPredicted RBP8.77□□□□□ -1.01
ZNF558-201ENST00000301475 MRPL36Q9P0J6 103 aaKnown RBP8.77□□□□□ -1.01
ZNF558-201ENST00000301475 KLF12Q9Y4X4 402 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 CEP295Q9C0D2 2601 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 H3BUT2 72 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 P01737 135 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.77□□□□□ -1.01
ZNF558-201ENST00000301475 NDFIP1Q9BT67 221 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 ZNF430Q9H8G1 570 aaPredicted RBP8.77□□□□□ -1.01
ZNF558-201ENST00000301475 HSPB8Q9UJY1 196 aa8.77□□□□□ -1.01
ZNF558-201ENST00000301475 C6orf15Q6UXA7 325 aaPredicted RBP8.76□□□□□ -1.01
ZNF558-201ENST00000301475 RBPMS2Q6ZRY4 209 aaKnown RBP8.76□□□□□ -1.01
ZNF558-201ENST00000301475 PIP4P2Q8N4L2 257 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 OR2Z1Q8NG97 314 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 HILPDAQ9Y5L2 63 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 SOX21Q9Y651 276 aaPredicted RBP8.76□□□□□ -1.01
ZNF558-201ENST00000301475 DMXL2Q8TDJ6 3036 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 PGPA6NDG6 321 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 K7EP34 96 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 OVOL3O00110 214 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 CHEK1O14757 476 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 IGKV3-15P01624 115 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 APOHP02749 345 aaPredicted RBP8.76□□□□□ -1.01
ZNF558-201ENST00000301475 CT45A6P0DMU7 189 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 CT45A5P0DMU8 189 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 CT45A7P0DMV0 189 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 CT83Q5H943 113 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 FAM201AQ5SY85 155 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 PEAR1Q5VY43 1037 aaPredicted RBP8.76□□□□□ -1.01
ZNF558-201ENST00000301475 INO80CQ6PI98 192 aaPredicted RBP8.76□□□□□ -1.01
ZNF558-201ENST00000301475 LINC00305Q7Z4B0 112 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 PDPNQ86YL7 162 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 NPIPB3Q92617 1050 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 ZNF747Q9BV97 191 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 PLCE1Q9P212 2302 aa8.76□□□□□ -1.01
ZNF558-201ENST00000301475 H3BTX0 84 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 DLL1O00548 723 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 CIDEAO60543 219 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 CECR9P0C854 216 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 TMEM116Q8NCL8 245 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 CACNG8Q8WXS5 425 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 RND1Q92730 232 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 RABAC1Q9UI14 185 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 COL27A1Q8IZC6 1860 aaPredicted RBP8.75□□□□□ -1.01
ZNF558-201ENST00000301475 INTS1Q8N201 2190 aaKnown RBP8.75□□□□□ -1.01
ZNF558-201ENST00000301475 LTAP01374 205 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 TCTAP57738 103 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 MSMPQ1L6U9 139 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 GTF2H5Q6ZYL4 71 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 BHLHA15Q7RTS1 189 aaPredicted RBP8.75□□□□□ -1.01
ZNF558-201ENST00000301475 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 PPP1R35Q8TAP8 253 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 ADTRPQ96IZ2 230 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 KBTBD11-OT1A0A1B0GTJ5 212 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 TCRBV4S1A1TA0A5B7 111 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 C10orf55Q5SWW7 151 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 RUSC1-AS1Q66K80 236 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 DHRS13Q6UX07 377 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 OR1L4Q8NGR5 311 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 OR1N2Q8NGR9 330 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
ZNF558-201ENST00000301475 H3BRM9 83 aa8.74□□□□□ -1.01
ZNF558-201ENST00000301475 GOSR1O95249 250 aa8.74□□□□□ -1.01
ZNF558-201ENST00000301475 FAM87AP0C7U9 286 aa8.74□□□□□ -1.01
ZNF558-201ENST00000301475 ACP1P24666 158 aa8.74□□□□□ -1.01
ZNF558-201ENST00000301475 KIR3DS1Q14943 382 aa8.74□□□□□ -1.01
ZNF558-201ENST00000301475 GUSBP1Q15486 140 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms