RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ZNF835Q9Y2P0 537 aa10.9□□□□□ -0.67
BCCIP-202ENST00000299130 RIF1Q5UIP0 2472 aaKnown RBP10.9□□□□□ -0.67
BCCIP-202ENST00000299130 PGPA6NDG6 321 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 CRYGBP07316 175 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 TBR1Q16650 682 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 LINC00322Q6ZN03 302 aaPredicted RBP10.89□□□□□ -0.67
BCCIP-202ENST00000299130 ASCL5Q7RTU5 278 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 ACACAQ13085 2346 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 IGHV2-26A0A0B4J1V2 119 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 M0R143 59 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 SLC25A5P05141 298 aaKnown RBP10.89□□□□□ -0.67
BCCIP-202ENST00000299130 GPR6P46095 362 aaPredicted RBP10.89□□□□□ -0.67
BCCIP-202ENST00000299130 RPL27AP46776 148 aaKnown RBP10.89□□□□□ -0.67
BCCIP-202ENST00000299130 LGALS7P47929 136 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 FAM231DQ6ZW35 169 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 NIT1Q86X76 327 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 GRAMD2BQ96HH9 432 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 TMEM68Q96MH6 324 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 C20orf144Q9BQM9 153 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
BCCIP-202ENST00000299130 ZNF331Q9NQX6 463 aaPredicted RBP10.89□□□□□ -0.67
BCCIP-202ENST00000299130 EPDR1Q9UM22 224 aa10.89□□□□□ -0.67
BCCIP-202ENST00000299130 TCAPO15273 167 aa10.88□□□□□ -0.67
BCCIP-202ENST00000299130 RPL19P84098 196 aaKnown RBP10.88□□□□□ -0.67
BCCIP-202ENST00000299130 PVRIGQ6DKI7 326 aa10.88□□□□□ -0.67
BCCIP-202ENST00000299130 TSKUQ8WUA8 353 aa10.88□□□□□ -0.67
BCCIP-202ENST00000299130 IGFBPL1Q8WX77 278 aa10.88□□□□□ -0.67
BCCIP-202ENST00000299130 SIGLEC9Q9Y336 463 aa10.88□□□□□ -0.67
BCCIP-202ENST00000299130 APC2O95996 2303 aa10.88□□□□□ -0.67
BCCIP-202ENST00000299130 GVINP1Q7Z2Y8 2422 aa10.88□□□□□ -0.67
BCCIP-202ENST00000299130 DIRC3C9JPN6 131 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 IGLV1-47P01700 117 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 TMEM183BQ1AE95 376 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 COX19Q49B96 90 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 Q71RC1 249 aaPredicted RBP10.87□□□□□ -0.67
BCCIP-202ENST00000299130 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 TEX45Q8NA69 505 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 C18orf32Q8TCD1 76 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 PERPQ96FX8 193 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 NEU1Q99519 415 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 VAMP8Q9BV40 100 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 ZZEF1O43149 2961 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 IGHV1-3A0A0C4DH29 117 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 ZNF324O75467 553 aaPredicted RBP10.87□□□□□ -0.67
BCCIP-202ENST00000299130 NBEAP1P0C6P0 100 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 TRGV9Q99603 122 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 MIEN1Q9BRT3 115 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 ZNF586Q9NXT0 402 aa10.87□□□□□ -0.67
BCCIP-202ENST00000299130 HIGD1CA8MV81 97 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 VSTM5A8MXK1 200 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 TEX22C9J3V5 150 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
BCCIP-202ENST00000299130 GP9P14770 177 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 COX7A1P24310 79 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 UBE2G1P62253 170 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 TCF24Q7RTU0 167 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 TMEM116Q8NCL8 245 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 WIPF2Q8TF74 440 aaPredicted RBP10.86□□□□□ -0.67
BCCIP-202ENST00000299130 FBXL15Q9H469 300 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 MALRD1Q5VYJ5 2156 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.86□□□□□ -0.67
BCCIP-202ENST00000299130 BUB1B-PAK6H3BSN5 160 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 C3orf79P0CE67 100 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 NTF3P20783 257 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 CAMPP49913 170 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 ETFRF1Q6IPR1 90 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 LINC01560Q8TB33 94 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 RALYQ9UKM9 306 aaKnown RBP10.86□□□□□ -0.67
BCCIP-202ENST00000299130 INSIG2Q9Y5U4 225 aa10.86□□□□□ -0.67
BCCIP-202ENST00000299130 HYPMO75409 117 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 CD24P25063 80 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 APOBEC3AP31941 199 aaPredicted RBP10.85□□□□□ -0.67
BCCIP-202ENST00000299130 A6NNC1 897 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 G0S2P27469 103 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 GRNP28799 593 aaKnown RBP10.85□□□□□ -0.67
BCCIP-202ENST00000299130 LDLRAD2Q5SZI1 272 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 PPP1R27Q86WC6 154 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 MLST8Q9BVC4 326 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 KLF12Q9Y4X4 402 aa10.85□□□□□ -0.67
BCCIP-202ENST00000299130 CASP6P55212 293 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 WNT10AQ9GZT5 417 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 Q9H3A6 140 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 F11RQ9Y624 299 aaKnown RBP10.84□□□□□ -0.67
BCCIP-202ENST00000299130 POLEQ07864 2286 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 SPTBN2O15020 2390 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 TOX4O94842 621 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 PSG1P11464 419 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 CTRLP40313 264 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 PRRX1P54821 245 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 STXBP6Q8NFX7 210 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 GPR82Q96P67 336 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 CLEC7AQ9BXN2 247 aa10.84□□□□□ -0.67
BCCIP-202ENST00000299130 TRAV8-1A0A0A6YYK1 113 aa10.83□□□□□ -0.68
BCCIP-202ENST00000299130 SIAH2O43255 324 aa10.83□□□□□ -0.68
BCCIP-202ENST00000299130 HIST1H1EP10412 219 aaKnown RBP10.83□□□□□ -0.68
BCCIP-202ENST00000299130 LYZP61626 148 aa10.83□□□□□ -0.68
BCCIP-202ENST00000299130 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
BCCIP-202ENST00000299130 ATOH7Q8N100 152 aa10.83□□□□□ -0.68
BCCIP-202ENST00000299130 C8orf46Q8TAG6 207 aa10.83□□□□□ -0.68
BCCIP-202ENST00000299130 GTSF1Q8WW33 167 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms