RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 CKS1BP61024 79 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 KLF17Q5JT82 389 aaPredicted RBP9.1□□□□□ -0.95
PBRM1-201ENST00000296302 CRIPAKQ8N1N5 446 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 SRRM5B3KS81 715 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 NTF4P34130 210 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 KIR3DS1Q14943 382 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 OR10W1Q8NGF6 305 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 NAA38Q9BRA0 125 aaKnown RBP9.1□□□□□ -0.95
PBRM1-201ENST00000296302 TRBV7-9A0A0J9YWB2 115 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 C15orf62A8K5M9 175 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 EVI2AP22794 236 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 TRGV9Q99603 122 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
PBRM1-201ENST00000296302 APC2O95996 2303 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 ZNF883P0CG24 379 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 GTSCR1Q86UQ5 136 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 BMPERQ8N8U9 685 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 RBMY1BA6NDE4 496 aaKnown RBP9.09□□□□□ -0.95
PBRM1-201ENST00000296302 RBMY1EA6NEQ0 496 aaKnown RBP9.09□□□□□ -0.95
PBRM1-201ENST00000296302 PSPNO60542 156 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 GFRA3O60609 400 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 RBMY1DP0C7P1 496 aaKnown RBP9.09□□□□□ -0.95
PBRM1-201ENST00000296302 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
PBRM1-201ENST00000296302 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 C9orf106Q8NAJ2 232 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 DMRTA2Q96SC8 542 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 DOCK3Q8IZD9 2030 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 IGHV3OR16-8A0A075B7F1 116 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 TRAV2A0A0B4J234 112 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
PBRM1-201ENST00000296302 SLC25A39Q9BZJ4 359 aaPredicted RBP9.09□□□□□ -0.95
PBRM1-201ENST00000296302 C5orf63A6NC05 138 aa9.09□□□□□ -0.96
PBRM1-201ENST00000296302 TFF1P04155 84 aa9.09□□□□□ -0.96
PBRM1-201ENST00000296302 BSPH1Q075Z2 132 aa9.09□□□□□ -0.96
PBRM1-201ENST00000296302 DMRTC2Q8IXT2 367 aaPredicted RBP9.09□□□□□ -0.96
PBRM1-201ENST00000296302 NEU4Q8WWR8 484 aaPredicted RBP9.09□□□□□ -0.96
PBRM1-201ENST00000296302 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
PBRM1-201ENST00000296302 GGNQ86UU5 652 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 TMPRSS3P57727 454 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 Q6ZRM9 215 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 DLX4Q92988 240 aaPredicted RBP9.08□□□□□ -0.96
PBRM1-201ENST00000296302 KLHDC3Q9BQ90 382 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 MESP1Q9BRJ9 268 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 RTTNQ86VV8 2226 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 PDLIM4P50479 330 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 GAGE1Q13065 139 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 RALGAPA1Q6GYQ0 2036 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 NPIPB5A8MRT5 1133 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 OCIAD2Q56VL3 154 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 LYZL1Q6UWQ5 148 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 FOXL2NBQ6ZUU3 175 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 GTSF1LQ9H1H1 148 aa9.08□□□□□ -0.96
PBRM1-201ENST00000296302 ESPL1Q14674 2120 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 TMEM238C9JI98 176 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 PPIFP30405 207 aaKnown RBP9.07□□□□□ -0.96
PBRM1-201ENST00000296302 ATXN8Q156A1 80 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 CD300EQ496F6 205 aaPredicted RBP9.07□□□□□ -0.96
PBRM1-201ENST00000296302 Q6P435 159 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 TMEM167AQ8TBQ9 72 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 PMS2P5A8MQ11 134 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 RHOGP84095 191 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 C9orf172C9J069 976 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 SMAD7O15105 426 aaKnown RBP9.07□□□□□ -0.96
PBRM1-201ENST00000296302 CD7P09564 240 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 CDKN1AP38936 164 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 NUP37Q8NFH4 326 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 DUX3Q96PT4 197 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
PBRM1-201ENST00000296302 TP53BP1Q12888 1972 aaPredicted RBP9.06□□□□□ -0.96
PBRM1-201ENST00000296302 TRAV3A0A0B4J244 114 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 TOMM40O96008 361 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 LYPD1Q8N2G4 141 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 MDC1Q14676 2089 aaKnown RBP9.06□□□□□ -0.96
PBRM1-201ENST00000296302 IGHV1-18A0A0C4DH31 117 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 LINC00473A8K010 186 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 LILRA1O75019 489 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 NCR2O95944 276 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 IGLC2P0DOY2 106 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 IGLC3P0DOY3 106 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 YPEL3P61236 119 aaPredicted RBP9.06□□□□□ -0.96
PBRM1-201ENST00000296302 EXOC3-AS1Q8N2X6 119 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 FAM57AQ8TBR7 257 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 A0A1B0GWJ7 208 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 OVOL1O14753 267 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 GHRHP01286 108 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 SLC25A15Q9Y619 301 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 ITGB1BP1O14713 200 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 MMP23AO75900 390 aa9.06□□□□□ -0.96
PBRM1-201ENST00000296302 SRSF6Q13247 344 aaKnown RBP9.05□□□□□ -0.96
PBRM1-201ENST00000296302 C10orf55Q5SWW7 151 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 C18orf32Q8TCD1 76 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 SCRT1Q9BWW7 348 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 TDGF1P13385 188 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 LINC01560Q8TB33 94 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 ZNF581Q9P0T4 197 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 SDK2Q58EX2 2172 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 M0R2P5 195 aa9.05□□□□□ -0.96
PBRM1-201ENST00000296302 FOXG1P55316 489 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms