RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 SSX9Q7RTT3 188 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 TEX45Q8NA69 505 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 CLRN3Q8NCR9 226 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 CACNG8Q8WXS5 425 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 HARBI1Q96MB7 349 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 TXNDC17Q9BRA2 123 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 RSG1Q9BU20 258 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 NPCDR1Q9BY65 106 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 EDA2RQ9HAV5 297 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 GAR1Q9NY12 217 aaKnown RBP8.15□□□□□ -1.1
RFC4-201ENST00000296273 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
RFC4-201ENST00000296273 A8MZ25 164 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 B4DEV8 164 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 LINC01619G3V211 115 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 PSMB3P49720 205 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 LINC00205P59089 165 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 RPL8P62917 257 aaKnown RBP8.14□□□□□ -1.11
RFC4-201ENST00000296273 FAM74A3Q4VXF1 159 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 ZFAND6Q6FIF0 208 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 ACSM6Q6P461 480 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 OR10G9Q8NGN4 311 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 OR10G7Q8NGN6 311 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 DLX4Q92988 240 aaPredicted RBP8.14□□□□□ -1.11
RFC4-201ENST00000296273 MRPL20Q9BYC9 149 aaKnown RBP8.14□□□□□ -1.11
RFC4-201ENST00000296273 TMEM231Q9H6L2 316 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 MANBALQ9NQG1 85 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 SMCO4Q9NRQ5 59 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 PRELID1Q9Y255 219 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 RYR2Q92736 4967 aa8.14□□□□□ -1.11
RFC4-201ENST00000296273 TRAV41A0A0B4J266 112 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 TEX50A0A1B0GTY4 177 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 LOC102723971A0A1B0GUV8 181 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 SMCO3A2RU48 225 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 MAP1LC3B2A6NCE7 125 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 PRSS46E5RG02 174 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 G3V318 75 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 DNASE2O00115 360 aaPredicted RBP8.13□□□□□ -1.11
RFC4-201ENST00000296273 ATP6V0E1O15342 81 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 SCO1O75880 301 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 BCL2P10415 239 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 RPS16P62249 146 aaKnown RBP8.13□□□□□ -1.11
RFC4-201ENST00000296273 PNRC1Q12796 327 aaPredicted RBP8.13□□□□□ -1.11
RFC4-201ENST00000296273 BSXQ3C1V8 233 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 FFAR4Q5NUL3 377 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 TEPPQ6URK8 271 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 VKORC1L1Q8N0U8 176 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 RNASEH2CQ8TDP1 164 aaKnown RBP8.13□□□□□ -1.11
RFC4-201ENST00000296273 OR5B12Q96R08 314 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 SRSF8Q9BRL6 282 aaKnown RBP8.13□□□□□ -1.11
RFC4-201ENST00000296273 MAP1LC3BQ9GZQ8 125 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 NDUFA4L2Q9NRX3 87 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 LYSTQ99698 3801 aa8.13□□□□□ -1.11
RFC4-201ENST00000296273 DNAH1Q9P2D7 4330 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 NBR2O15453 112 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 MT-CO2P00403 227 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 IGKV1-16P04430 117 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 SRP19P09132 144 aaKnown RBP8.12□□□□□ -1.11
RFC4-201ENST00000296273 SAA1P0DJI8 122 aaPredicted RBP8.12□□□□□ -1.11
RFC4-201ENST00000296273 RPL29P47914 159 aaKnown RBP8.12□□□□□ -1.11
RFC4-201ENST00000296273 GUCA2BQ16661 112 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 ETFRF1Q6IPR1 90 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 MMD2Q8IY49 270 aa8.12□□□□□ -1.11
RFC4-201ENST00000296273 A0A087WWC5 75 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 TRAV3A0A0B4J244 114 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 CXorf65A6NEN9 183 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 TMEM250H0YL14 139 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 CORTO00230 105 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 RRHO14718 337 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 CA2P00918 260 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 LGALS1P09382 135 aaKnown RBP8.11□□□□□ -1.11
RFC4-201ENST00000296273 IGHV4-30-4P0DP06 118 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 CRIP2P52943 208 aaPredicted RBP8.11□□□□□ -1.11
RFC4-201ENST00000296273 SLURP1P55000 103 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 CCL20P78556 96 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 ICAM4Q14773 271 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 C5orf64Q2M2E5 130 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 ATRAIDQ6UW56 229 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 TMEM144Q7Z5S9 345 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 RPP25LQ8N5L8 163 aaKnown RBP8.11□□□□□ -1.11
RFC4-201ENST00000296273 C15orf54Q8N8G6 183 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 NPBQ8NG41 125 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 ARPC1AQ92747 370 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 SLC35E1Q96K37 410 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 RNF2Q99496 336 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 NIPSNAP3BQ9BS92 247 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 ELOVL1Q9BW60 279 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 TPSG1Q9NRR2 321 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 C19orf73Q9NVV2 129 aa8.11□□□□□ -1.11
RFC4-201ENST00000296273 EPPK1P58107 5090 aaKnown RBP8.11□□□□□ -1.11
RFC4-201ENST00000296273 IGHV4OR15-8A0A075B7B6 117 aa8.1□□□□□ -1.11
RFC4-201ENST00000296273 A0A087WW49 117 aa8.1□□□□□ -1.11
RFC4-201ENST00000296273 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
RFC4-201ENST00000296273 C9JQL5 133 aa8.1□□□□□ -1.11
RFC4-201ENST00000296273 TSPAN4O14817 238 aa8.1□□□□□ -1.11
RFC4-201ENST00000296273 ACTL6BO94805 426 aa8.1□□□□□ -1.11
RFC4-201ENST00000296273 NDUFA3O95167 84 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms