RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 KLK9Q9UKQ9 250 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 IGHV1-69DA0A0B4J2H0 117 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 MDFIC2A0A1B0GVS7 189 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 C9JCJ5 164 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 IGHV1-69P01742 117 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 IGLC1P0CG04 106 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 RPL35P42766 123 aaKnown RBP7.23□□□□□ -1.25
PDPN-201ENST00000294489 KCNIP4Q6PIL6 250 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 EPG5Q9HCE0 2579 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 TACC2O95359 2948 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 TRBV20OR9-2A0A075B6H5 130 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 TRAV20A0A0B4J274 112 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 HELTA6NFD8 242 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 NPIPB5A8MRT5 1133 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 J3QKU1 62 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 PFN1P07737 140 aaKnown RBP7.23□□□□□ -1.25
PDPN-201ENST00000294489 CRYBB3P26998 211 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 PLP1P60201 277 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 SNRPEP62304 92 aaKnown RBP7.23□□□□□ -1.25
PDPN-201ENST00000294489 LOXL1Q08397 574 aaPredicted RBP7.23□□□□□ -1.25
PDPN-201ENST00000294489 AURKAIP1Q9NWT8 199 aaPredicted RBP7.23□□□□□ -1.25
PDPN-201ENST00000294489 LY96Q9Y6Y9 160 aa7.23□□□□□ -1.25
PDPN-201ENST00000294489 SPTAN1Q13813 2472 aaKnown RBP7.22□□□□□ -1.25
PDPN-201ENST00000294489 PGPEP1LA6NFU8 196 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 B4DSR2 109 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 GGTLC3B5MD39 225 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 PYYP10082 97 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 SRP14P37108 136 aaKnown RBP7.22□□□□□ -1.25
PDPN-201ENST00000294489 DEFB113Q30KQ7 82 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 SFRP2Q96HF1 295 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 THYN1Q9P016 225 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 K7EIM0 57 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 PSG1P11464 419 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 GNG4P50150 75 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 OCC1Q8TAD7 63 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 GSX1Q9H4S2 264 aaPredicted RBP7.22□□□□□ -1.25
PDPN-201ENST00000294489 HIGD1AQ9Y241 93 aa7.22□□□□□ -1.25
PDPN-201ENST00000294489 C5orf52A6NGY3 159 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 RD3LP0DJH9 198 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 CR1P17927 2039 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 COL8A1P27658 744 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 LYZP61626 148 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 AKAP6Q13023 2319 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 PRSS57Q6UWY2 283 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 KRTAP1-3Q8IUG1 177 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 TTC9CQ8N5M4 171 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 Q8N9W7 124 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 BTF3L4Q96K17 158 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 PYGO2Q9BRQ0 406 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 MYO18BQ8IUG5 2567 aa7.21□□□□□ -1.25
PDPN-201ENST00000294489 TRAV30A0A087WSZ9 112 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 A0A1W2PPQ1 181 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 PPP5D1E7EU14 171 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 TRGC2P03986 189 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 TIGITQ495A1 244 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 FAM120AOSQ5T036 256 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 ASPHD1Q5U4P2 390 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 FXYD5Q96DB9 178 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 IMMP2LQ96T52 175 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 VPS13CQ709C8 3753 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 AP4M1O00189 453 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 HLA-DRB1P01911 266 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 EGR2P11161 476 aaPredicted RBP7.21□□□□□ -1.26
PDPN-201ENST00000294489 HNF1AP20823 631 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 LINC01356Q8N9X3 169 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 OR10G8Q8NGN5 311 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 PIFOQ8TCI5 191 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 TCEAL7Q9BRU2 100 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 ELOVL1Q9BW60 279 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 SRD5A3Q9H8P0 318 aa7.21□□□□□ -1.26
PDPN-201ENST00000294489 IGLV11-55A0A075B6I3 123 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 J3QLI3 93 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 IGKV1-17P01599 117 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 G0S2P27469 103 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 NDPQ00604 133 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 CENPWQ5EE01 88 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 KLF17Q5JT82 389 aaPredicted RBP7.2□□□□□ -1.26
PDPN-201ENST00000294489 TEX38Q6PEX7 206 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 WNK2Q9Y3S1 2297 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 IGHV7-81A0A0B4J1V7 117 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 UBE2CO00762 179 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 GNG7O60262 68 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 SCGB2A1O75556 95 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 MFAP4P55083 255 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 FABP9Q0Z7S8 132 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 S100A7AQ86SG5 101 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 FANCD2OSQ96PS1 177 aa7.2□□□□□ -1.26
PDPN-201ENST00000294489 MED13LQ71F56 2210 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 GGCTO75223 188 aaKnown RBP7.19□□□□□ -1.26
PDPN-201ENST00000294489 NBEAP1P0C6P0 100 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 CNN1P51911 297 aaKnown RBP7.19□□□□□ -1.26
PDPN-201ENST00000294489 FOXL1Q12952 345 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 TENM4Q6N022 2769 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 TOMM40O96008 361 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 FSHBP01225 129 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
PDPN-201ENST00000294489 TAS2R60P59551 318 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 RANP62826 216 aaKnown RBP7.19□□□□□ -1.26
PDPN-201ENST00000294489 ZNF329Q86UD4 541 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 SGMS2Q8NHU3 365 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms