RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 CCKARP32238 428 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 MAS1LP35410 378 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 MFAP4P55083 255 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 NDPQ00604 133 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 RIGQ13278 110 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 C10orf91Q5T1B1 145 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 BET1LQ9NYM9 111 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 ELOVL5Q9NYP7 299 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 C1RLQ9NZP8 487 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 FBXL7Q9UJT9 491 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 TBL2Q9Y4P3 447 aaKnown RBP3.92□□□□□ -1.78
UBR1-201ENST00000290650 ATG2AQ2TAZ0 1938 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 TNFSF13O75888 250 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 ADIPOQQ15848 244 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 ZNF672Q499Z4 452 aaPredicted RBP3.92□□□□□ -1.78
UBR1-201ENST00000290650 FOXL2NBQ6ZUU3 175 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 DMRTC2Q8IXT2 367 aaPredicted RBP3.92□□□□□ -1.78
UBR1-201ENST00000290650 TMEM256Q8N2U0 113 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 TMEM116Q8NCL8 245 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 SMDT1Q9H4I9 107 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 GP6Q9HCN6 339 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 E7EQL1 145 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 AREGP15514 252 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 EVI2AP22794 236 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 MBD3L1Q8WWY6 194 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 KCNS1Q96KK3 526 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 PARD6GQ9BYG4 376 aaPredicted RBP3.92□□□□□ -1.78
UBR1-201ENST00000290650 TMEM133Q9H2Q1 129 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 FRYQ5TBA9 3013 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 A8MWL6 223 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 NPIPB11E5RHQ5 1161 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 TMEM178BH3BS89 294 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 GNLYP22749 145 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 SONP18583 2426 aaKnown RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 TRGV3P03979 118 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 SSBP2P81877 361 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 SPSB3Q6PJ21 355 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 PPP1R27Q86WC6 154 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 LRTM2Q8N967 370 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 METTL26Q96S19 204 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 EXPH5Q8NEV8 1989 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 IGKV2-40A0A087WW87 121 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 IGHV2-26A0A0B4J1V2 119 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 H7C2G1 150 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 M0R381 172 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 IGKV2D-40P01614 121 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 ZNF138P52744 262 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 ZNF726P1Q15940 193 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 TMEM183AQ8IXX5 376 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 TCTEX1D1Q8N7M0 179 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 PIMREGQ9BSJ6 248 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 DPM3Q9P2X0 92 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 PMS2P5A8MQ11 134 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 DKK1O94907 266 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 RPL7P18124 248 aaKnown RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 COMPP49747 757 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 RPL24P83731 157 aaKnown RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 CCDC144NLQ6NUI1 221 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 C1orf174Q8IYL3 243 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 CIARTQ8N365 385 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 ARPC1AQ92747 370 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 TRAV40A0A0B4J280 105 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 LYL1P12980 280 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 CX3CL1P78423 397 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 HIST3H2BBQ8N257 126 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 TEX45Q8NA69 505 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 IL36BQ9NZH7 164 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 C9JCJ5 164 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 NDUFS7O75251 213 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 IGHV2-5P01817 119 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H1AQ02539 215 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 C2orf83Q53S99 150 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 TMEM78Q5T7P6 136 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 REC114Q7Z4M0 266 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 Q8TAT8 98 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 OSR1Q8TAX0 266 aaPredicted RBP3.91□□□□□ -1.78
UBR1-201ENST00000290650 AGMATQ9BSE5 352 aa3.91□□□□□ -1.78
UBR1-201ENST00000290650 C7orf71A4D174 169 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 TM4SF5O14894 197 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 IGHV2-70P01814 119 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 Q1RN00 199 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 COL5A1-AS1Q5SY13 56 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 RBPMS2Q6ZRY4 209 aaKnown RBP3.9□□□□□ -1.78
UBR1-201ENST00000290650 COLCA1Q6ZS62 124 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 VMO1Q7Z5L0 202 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 TLN2Q9Y4G6 2542 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 ASPMQ8IZT6 3477 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 A6NNC1 897 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 TMEM250H0YL14 139 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 LEPROTL1O95214 131 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 HLA-DRB1P01911 266 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 IGHV1-8P0DP01 117 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 HAPLN4Q86UW8 402 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 C7orf69Q9H7B7 122 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 MGAQ8IWI9 3026 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 ETV2O00321 342 aaPredicted RBP3.9□□□□□ -1.78
UBR1-201ENST00000290650 SELENOTP62341 195 aa3.9□□□□□ -1.78
UBR1-201ENST00000290650 PLA2G2CQ5R387 149 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms