RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MDS2Q8NDY4 140 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 GRAMD2BQ96HH9 432 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 TP73-AS1Q9UF72 201 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 FOXA2Q9Y261 457 aaPredicted RBP10.93□□□□□ -0.66
SCAF4-201ENST00000286835 NDUFB3O43676 98 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 PERPQ96FX8 193 aa10.93□□□□□ -0.66
SCAF4-201ENST00000286835 HBBP68871 147 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 FBLN7Q53RD9 439 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 FAM90A1Q86YD7 464 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 LSM4Q9Y4Z0 139 aaKnown RBP10.92□□□□□ -0.66
SCAF4-201ENST00000286835 A0A1W2PNU3 283 aaPredicted RBP10.92□□□□□ -0.66
SCAF4-201ENST00000286835 NBEAP1P0C6P0 100 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 COX7A1P24310 79 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 LINC00310P59036 64 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 LINC01560Q8TB33 94 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
SCAF4-201ENST00000286835 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 SRRM4A7MD48 611 aaKnown RBP10.92□□□□□ -0.66
SCAF4-201ENST00000286835 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
SCAF4-201ENST00000286835 FAM162BQ5T6X4 162 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 GOLT1AQ6ZVE7 132 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 MALRD1Q5VYJ5 2156 aa10.92□□□□□ -0.66
SCAF4-201ENST00000286835 IGLL1P15814 213 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 FAM222BQ8WU58 562 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 FAM90A9PA6NNJ1 464 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 SSBP2P81877 361 aaPredicted RBP10.91□□□□□ -0.66
SCAF4-201ENST00000286835 LRRC10Q5BKY1 277 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 MUC15Q8N387 334 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 Q8N7P7 452 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 TMEM14BQ9NUH8 114 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 IGKV1OR2-108A0A075B7D4 117 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 IGKV3-15P01624 115 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 CT45A10P0DMU9 189 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 S4R3C0 116 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 LOXL3P58215 753 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 PRR20EP86478 221 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 PRR20CP86479 221 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 PRR20DP86480 221 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 PRR20BP86481 221 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 PRR20AP86496 221 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 LDLRAD2Q5SZI1 272 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 VSTM2AQ8TAG5 236 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 SRSF12Q8WXF0 261 aaKnown RBP10.91□□□□□ -0.66
SCAF4-201ENST00000286835 C11orf52Q96A22 123 aa10.91□□□□□ -0.66
SCAF4-201ENST00000286835 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.9□□□□□ -0.66
SCAF4-201ENST00000286835 RAB37Q96AX2 223 aa10.9□□□□□ -0.66
SCAF4-201ENST00000286835 ZNF714Q96N38 554 aa10.9□□□□□ -0.66
SCAF4-201ENST00000286835 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
SCAF4-201ENST00000286835 LY96Q9Y6Y9 160 aa10.9□□□□□ -0.66
SCAF4-201ENST00000286835 CCL25O15444 150 aa10.9□□□□□ -0.66
SCAF4-201ENST00000286835 C1orf229Q6ZS94 237 aaPredicted RBP10.9□□□□□ -0.66
SCAF4-201ENST00000286835 PIP4P1Q86T03 277 aa10.9□□□□□ -0.66
SCAF4-201ENST00000286835 NEUROG1Q92886 237 aa10.9□□□□□ -0.66
SCAF4-201ENST00000286835 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
SCAF4-201ENST00000286835 CHODLQ9H9P2 273 aa10.9□□□□□ -0.66
SCAF4-201ENST00000286835 C19orf24Q9BVV8 132 aa10.9□□□□□ -0.67
SCAF4-201ENST00000286835 RNASE2P10153 161 aaKnown RBP10.89□□□□□ -0.67
SCAF4-201ENST00000286835 PAX1P15863 534 aa10.89□□□□□ -0.67
SCAF4-201ENST00000286835 GAGE1Q13065 139 aa10.89□□□□□ -0.67
SCAF4-201ENST00000286835 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
SCAF4-201ENST00000286835 KLRB1Q12918 225 aa10.89□□□□□ -0.67
SCAF4-201ENST00000286835 FAM57AQ8TBR7 257 aa10.89□□□□□ -0.67
SCAF4-201ENST00000286835 RNASE8Q8TDE3 154 aaKnown RBP10.89□□□□□ -0.67
SCAF4-201ENST00000286835 EPDR1Q9UM22 224 aa10.89□□□□□ -0.67
SCAF4-201ENST00000286835 K7EQM0 130 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 UBE2V1Q13404 147 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 EBLN2Q6P2I7 272 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 BPIFA4PQ86YQ2 179 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 OR4C13Q8NGP0 309 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 RPP21Q9H633 154 aaKnown RBP10.88□□□□□ -0.67
SCAF4-201ENST00000286835 A0A087X0K7 114 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 C17orf58Q2M2W7 97 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 WFDC3Q8IUB2 231 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 TMEM116Q8NCL8 245 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 GPR82Q96P67 336 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 COX11Q9Y6N1 276 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 GLRXP35754 106 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 DLX1P56177 255 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 FXYD7P58549 80 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 EIF4EBP1Q13541 118 aaPredicted RBP10.88□□□□□ -0.67
SCAF4-201ENST00000286835 TMEM249Q2WGJ8 235 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 ONECUT1Q9UBC0 465 aa10.88□□□□□ -0.67
SCAF4-201ENST00000286835 F2RL2O00254 374 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 AMMECR1LQ6DCA0 310 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 FBLL1A6NHQ2 334 aaKnown RBP10.87□□□□□ -0.67
SCAF4-201ENST00000286835 PPIAL4DF5H284 164 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 TIMM23BQ5SRD1 257 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 CIARTQ8N365 385 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-201ENST00000286835 TNRC6AQ8NDV7 1962 aaKnown RBP10.87□□□□□ -0.67
SCAF4-201ENST00000286835 RPL27AP46776 148 aaKnown RBP10.87□□□□□ -0.67
SCAF4-201ENST00000286835 RELQ04864 619 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-201ENST00000286835 C2orf83Q53S99 150 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 STXBP6Q8NFX7 210 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 NBL1P41271 181 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 LINC00173Q6ZV60 143 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 RPRMLQ8N4K4 120 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-201ENST00000286835 SLC25A2Q9BXI2 301 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 Q9H3A6 140 aa10.87□□□□□ -0.67
SCAF4-201ENST00000286835 PPP1R14DQ9NXH3 145 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms