RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 VAMP3Q15836 100 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 RBFOX3A6NFN3 312 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 CDX1P47902 265 aaPredicted RBP6.21□□□□□ -1.41
EPHA4-201ENST00000281821 PAX2Q02962 417 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 RAB24Q969Q5 203 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 CTDSP1Q9GZU7 261 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 ZNF586Q9NXT0 402 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 NAT8Q9UHE5 227 aa6.21□□□□□ -1.41
EPHA4-201ENST00000281821 RANP62826 216 aaKnown RBP6.21□□□□□ -1.42
EPHA4-201ENST00000281821 DUX4L9Q6RFH8 374 aaPredicted RBP6.21□□□□□ -1.42
EPHA4-201ENST00000281821 CIARTQ8N365 385 aaPredicted RBP6.21□□□□□ -1.42
EPHA4-201ENST00000281821 A0A1W2PPQ1 181 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 MMP23AO75900 390 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 LYL1P12980 280 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 FHITP49789 147 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 ZNF134P52741 427 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 MEF2BQ02080 365 aaPredicted RBP6.21□□□□□ -1.42
EPHA4-201ENST00000281821 WDR73Q6P4I2 378 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 FAM103A1Q9BTL3 118 aaKnown RBP6.21□□□□□ -1.42
EPHA4-201ENST00000281821 PRR13Q9NZ81 148 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 RFNGQ9Y644 331 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 K7EMT4 169 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 CRYGCP07315 174 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 IGHV4-38-2P0DP08 117 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 SUMO1P63165 101 aaKnown RBP6.21□□□□□ -1.42
EPHA4-201ENST00000281821 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 GOLT1BQ9Y3E0 138 aa6.21□□□□□ -1.42
EPHA4-201ENST00000281821 IGHV3-11P01762 117 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 REG1AP05451 166 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 RAB5AP20339 215 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 HABP2Q14520 560 aaPredicted RBP6.2□□□□□ -1.42
EPHA4-201ENST00000281821 C9orf66Q5T8R8 295 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 Q6AWC8 147 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 ANAPC16Q96DE5 110 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 ABCA1O95477 2261 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 ZNF90Q03938 601 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 AARDQ4LEZ3 155 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 LDLRAD2Q5SZI1 272 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 CYB561D1Q8N8Q1 229 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 MAPK1IP1LQ8NDC0 245 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 FLNBO75369 2602 aaKnown RBP6.2□□□□□ -1.42
EPHA4-201ENST00000281821 G3V3Q6 166 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 TCAPO15273 167 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 LINC00305Q7Z4B0 112 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 NRGNQ92686 78 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 ASCL2Q99929 193 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 TRAV1-1A0A0B4J248 108 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 SEC14L6B5MCN3 397 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 NDUFS6O75380 124 aaKnown RBP6.2□□□□□ -1.42
EPHA4-201ENST00000281821 SAP30O75446 220 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 CRLF1O75462 422 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 BRI3O95415 125 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 C21orf62-AS1Q17RA5 79 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 C5orf56Q8N8D9 126 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 A8MWL6 223 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 H0Y8G0 127 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 PPP1R17O96001 155 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 CD24P25063 80 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 CDSNQ15517 529 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 BLNKQ8WV28 456 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 ZFP30Q9Y2G7 519 aa6.2□□□□□ -1.42
EPHA4-201ENST00000281821 TMEM50AO95807 157 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 APELAP0DMC3 54 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 NTF3P20783 257 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 SEC11CQ9BY50 192 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 ISLRO14498 428 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 GCHFRP30047 84 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 RIGQ13278 110 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 TREML4Q6UXN2 200 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 LIME1Q9H400 295 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 SEPSECSQ9HD40 501 aaKnown RBP6.19□□□□□ -1.42
EPHA4-201ENST00000281821 CHD9Q3L8U1 2897 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 NDUFA11Q86Y39 141 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 Q8N9W7 124 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 A0A1B0GW15 77 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 OR11H12B2RN74 326 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 CHEK1O14757 476 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 P01737 135 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 SPRNQ5BIV9 151 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 RSG1Q9BU20 258 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 VAMP8Q9BV40 100 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 SONP18583 2426 aaKnown RBP6.19□□□□□ -1.42
EPHA4-201ENST00000281821 PGPA6NDG6 321 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 C15orf62A8K5M9 175 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 ZNF253O75346 499 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 AWAT1Q58HT5 328 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 OR4C5Q8NGB2 326 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 ISOC2Q96AB3 205 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 GPHA2Q96T91 129 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 NRN1Q9NPD7 142 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 EML6Q6ZMW3 1958 aa6.19□□□□□ -1.42
EPHA4-201ENST00000281821 IGHV7-81A0A0B4J1V7 117 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 KRTDAPP60985 99 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 SIGLEC15Q6ZMC9 328 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 TMEM37Q8WXS4 190 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
EPHA4-201ENST00000281821 OR2T8A6NH00 312 aa6.18□□□□□ -1.42
EPHA4-201ENST00000281821 LY6G6DO95868 133 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms