RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 RD3LP0DJH9 198 aa10.6□□□□□ -0.71
HMGN3-201ENST00000275036 ANXA7P20073 488 aaKnown RBP10.6□□□□□ -0.71
HMGN3-201ENST00000275036 GPX4P36969 197 aaPredicted RBP10.6□□□□□ -0.71
HMGN3-201ENST00000275036 ATP5IP56385 69 aaPredicted RBP10.6□□□□□ -0.71
HMGN3-201ENST00000275036 ZNF90Q03938 601 aa10.6□□□□□ -0.71
HMGN3-201ENST00000275036 DHRS2Q13268 280 aa10.6□□□□□ -0.71
HMGN3-201ENST00000275036 BOLA1Q9Y3E2 137 aa10.6□□□□□ -0.71
HMGN3-201ENST00000275036 IGKV1OR2-108A0A075B7D4 117 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 A0A0J9YWU9 116 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 PRSS46E5RG02 174 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 WRBO00258 174 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 SYNGR2O43760 224 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 LYG2Q86SG7 212 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 OR51G1Q8NGK1 321 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 IL17DQ8TAD2 202 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 NARS2Q96I59 477 aaKnown RBP10.59□□□□□ -0.71
HMGN3-201ENST00000275036 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 C7orf50Q9BRJ6 194 aaKnown RBP10.59□□□□□ -0.71
HMGN3-201ENST00000275036 CSTL1Q9H114 145 aa10.59□□□□□ -0.71
HMGN3-201ENST00000275036 BUB3O43684 328 aa10.58□□□□□ -0.72
HMGN3-201ENST00000275036 MED6O75586 246 aa10.58□□□□□ -0.72
HMGN3-201ENST00000275036 RAB11AP62491 216 aa10.58□□□□□ -0.72
HMGN3-201ENST00000275036 RNF125Q96EQ8 232 aa10.58□□□□□ -0.72
HMGN3-201ENST00000275036 GRAMD2BQ96HH9 432 aa10.58□□□□□ -0.72
HMGN3-201ENST00000275036 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
HMGN3-201ENST00000275036 ZFP92A6NM28 416 aa10.57□□□□□ -0.72
HMGN3-201ENST00000275036 CENPXA8MT69 81 aa10.57□□□□□ -0.72
HMGN3-201ENST00000275036 H3BP45 60 aa10.57□□□□□ -0.72
HMGN3-201ENST00000275036 ZNF688P0C7X2 276 aa10.57□□□□□ -0.72
HMGN3-201ENST00000275036 ID3Q02535 119 aa10.57□□□□□ -0.72
HMGN3-201ENST00000275036 OR4D5Q8NGN0 318 aa10.57□□□□□ -0.72
HMGN3-201ENST00000275036 CIB3Q96Q77 187 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-201ENST00000275036 HELTA6NFD8 242 aa10.56□□□□□ -0.72
HMGN3-201ENST00000275036 LYRM1O43325 122 aa10.56□□□□□ -0.72
HMGN3-201ENST00000275036 POLR2GP62487 172 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGN3-201ENST00000275036 C4orf46Q504U0 113 aa10.56□□□□□ -0.72
HMGN3-201ENST00000275036 SPANXN5Q5MJ07 72 aa10.56□□□□□ -0.72
HMGN3-201ENST00000275036 THAP8Q8NA92 274 aa10.56□□□□□ -0.72
HMGN3-201ENST00000275036 COQ8AQ8NI60 647 aa10.56□□□□□ -0.72
HMGN3-201ENST00000275036 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
HMGN3-201ENST00000275036 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
HMGN3-201ENST00000275036 GIG44P09565 113 aaPredicted RBP10.55□□□□□ -0.72
HMGN3-201ENST00000275036 EIF2B2P49770 351 aaKnown RBP10.55□□□□□ -0.72
HMGN3-201ENST00000275036 OR2F1Q13607 317 aa10.55□□□□□ -0.72
HMGN3-201ENST00000275036 PMS2P11Q13670 270 aa10.55□□□□□ -0.72
HMGN3-201ENST00000275036 SIGLEC15Q6ZMC9 328 aa10.55□□□□□ -0.72
HMGN3-201ENST00000275036 TRPT1Q86TN4 253 aaKnown RBP10.55□□□□□ -0.72
HMGN3-201ENST00000275036 TRGV9Q99603 122 aa10.55□□□□□ -0.72
HMGN3-201ENST00000275036 C20orf85Q9H1P6 137 aa10.55□□□□□ -0.72
HMGN3-201ENST00000275036 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-201ENST00000275036 NKX2-1P43699 371 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-201ENST00000275036 AP2S1P53680 142 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-201ENST00000275036 PAX9P55771 341 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 LYZP61626 148 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 OR8G2PQ6IF36 304 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 GSG1LQ6UXU4 331 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 TMEM182Q6ZP80 229 aaPredicted RBP10.54□□□□□ -0.72
HMGN3-201ENST00000275036 STHQ8IWL8 128 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 MITD1Q8WV92 249 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 NRN1Q9NPD7 142 aa10.54□□□□□ -0.72
HMGN3-201ENST00000275036 STRAPQ9Y3F4 350 aaKnown RBP10.54□□□□□ -0.72
HMGN3-201ENST00000275036 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 SSSCA1O60232 199 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 CCNKO75909 580 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 IFNA21P01568 189 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 TCRBP04435 133 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 RPP30P78346 268 aaKnown RBP10.53□□□□□ -0.72
HMGN3-201ENST00000275036 PSMG4Q5JS54 123 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 ACOT7LQ6ZUV0 252 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 PSENENQ9NZ42 101 aa10.53□□□□□ -0.72
HMGN3-201ENST00000275036 KMT2AQ03164 3969 aa10.52□□□□□ -0.72
HMGN3-201ENST00000275036 TRAV6A0A075B6T7 132 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 CXorf65A6NEN9 183 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 SNRPGP15A8MWD9 76 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 JTBO76095 146 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 C4BPBP20851 252 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 GATA2P23769 480 aaPredicted RBP10.52□□□□□ -0.73
HMGN3-201ENST00000275036 IAH1Q2TAA2 248 aaPredicted RBP10.52□□□□□ -0.73
HMGN3-201ENST00000275036 CNPY1Q3B7I2 92 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 ZBTB8BQ8NAP8 495 aaPredicted RBP10.52□□□□□ -0.73
HMGN3-201ENST00000275036 OR11H2Q8NH07 326 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 RAB40CQ96S21 281 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 RARRES2Q99969 163 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 CCDC32Q9BV29 185 aa10.52□□□□□ -0.73
HMGN3-201ENST00000275036 WDR12Q9GZL7 423 aaKnown RBP10.52□□□□□ -0.73
HMGN3-201ENST00000275036 CCSO14618 274 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 SCGB1D2O95969 90 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 FABP1P07148 127 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 DEFB1P60022 68 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 SMIM8Q96KF7 97 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 SEC22CQ9BRL7 303 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 NUDT15Q9NV35 164 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
HMGN3-201ENST00000275036 RCL1Q9Y2P8 373 aaKnown RBP10.51□□□□□ -0.73
HMGN3-201ENST00000275036 A6NHS1 94 aa10.5□□□□□ -0.73
HMGN3-201ENST00000275036 SOCS3O14543 225 aa10.5□□□□□ -0.73
HMGN3-201ENST00000275036 ATF4P18848 351 aaPredicted RBP10.5□□□□□ -0.73
HMGN3-201ENST00000275036 NUP62P37198 522 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms