RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 DEDDO75618 318 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 SPP1P10451 314 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 MIFP14174 115 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 EIF2B2P49770 351 aaKnown RBP7.04□□□□□ -1.28
LRTM1-201ENST00000273286 ZNF846Q147U1 533 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 MEF2DQ14814 521 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 RNASE10Q5GAN6 216 aaKnown RBP7.04□□□□□ -1.28
LRTM1-201ENST00000273286 MORN3Q6PF18 240 aaPredicted RBP7.04□□□□□ -1.28
LRTM1-201ENST00000273286 TBC1D26Q86UD7 250 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 STHQ8IWL8 128 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 PINX1Q96BK5 328 aaKnown RBP7.04□□□□□ -1.28
LRTM1-201ENST00000273286 ZNF486Q96H40 463 aaPredicted RBP7.04□□□□□ -1.28
LRTM1-201ENST00000273286 PDCD10Q9BUL8 212 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 CCDC32Q9BV29 185 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 FBXL17Q9UF56 701 aa7.04□□□□□ -1.28
LRTM1-201ENST00000273286 IGKV3-7A0A075B6H7 116 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 NPPCP23582 126 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 HLA-DMAP28067 261 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 NANOS2P60321 138 aaKnown RBP7.03□□□□□ -1.28
LRTM1-201ENST00000273286 ZNF79Q15937 498 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 PHLDA2Q53GA4 152 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 TOMM20LQ6UXN7 152 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 SLC35G3Q8N808 338 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 TMEM229BQ8NBD8 167 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 GRAMD2BQ96HH9 432 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 ZNF414Q96IQ9 312 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 SRRQ9GZT4 340 aa7.03□□□□□ -1.28
LRTM1-201ENST00000273286 PUS1Q9Y606 427 aaKnown RBP eCLIP7.03□□□□□ -1.28
LRTM1-201ENST00000273286 TRAV30A0A087WSZ9 112 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 IGHV3-49A0A0A0MS15 119 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 B3GALNT1O75752 331 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 AKAIN1P0CW23 69 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 PSG1P11464 419 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 AKR1C2P52895 323 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 PPP5CP53041 499 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 DEFB131AP59861 70 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 RND3P61587 244 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 TOMM5Q8N4H5 51 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 ARRDC1Q8N5I2 433 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 MRGPRFQ96AM1 343 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 METTL26Q96S19 204 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 KLK11Q9UBX7 282 aa7.02□□□□□ -1.29
LRTM1-201ENST00000273286 IGHV3OR16-13A0A075B7E8 117 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 IGHV3-74A0A0B4J1X5 117 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 CENPXA8MT69 81 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 DISC1C4P0D8 188 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 RAB3DO95716 219 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 TMEM50AO95807 157 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 IFNA17P01571 189 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 CD74P04233 296 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 AP2S1P53680 142 aaPredicted RBP7.01□□□□□ -1.29
LRTM1-201ENST00000273286 NUTF2P61970 127 aaKnown RBP7.01□□□□□ -1.29
LRTM1-201ENST00000273286 PVRIGQ6DKI7 326 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 STEAP1BQ6NZ63 245 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 LINC00336Q6ZUF6 198 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 Q8NAQ8 132 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 TRIM63Q969Q1 353 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 PRRT1Q99946 306 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 ENY2Q9NPA8 101 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 CACFD1Q9UGQ2 172 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 RABAC1Q9UI14 185 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 TRAV10A0A0B4J240 114 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 RPS10-NUDT3A0A1W2PQS6 291 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 ANKRD20A5PA0PJZ0 165 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 HELTA6NFD8 242 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 NAP1L6A6NFF2 107 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 ZNF705EA8MWA4 302 aaPredicted RBP7.01□□□□□ -1.29
LRTM1-201ENST00000273286 IGLL5B9A064 214 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 CLN5O75503 358 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 IGKV1-39P01597 117 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 CD3DP04234 171 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 IGKV1D-39P04432 117 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 CRYBB3P26998 211 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 LEMD1Q68G75 181 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 TRPT1Q86TN4 253 aaKnown RBP7.01□□□□□ -1.29
LRTM1-201ENST00000273286 OR4X1Q8NH49 305 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 C7orf50Q9BRJ6 194 aaKnown RBP7.01□□□□□ -1.29
LRTM1-201ENST00000273286 C1QTNF4Q9BXJ3 329 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 SCP2D1Q9UJQ7 156 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 APLNQ9ULZ1 77 aa7.01□□□□□ -1.29
LRTM1-201ENST00000273286 K7EQG2 157 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 IGHV3-48P01763 117 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 IL7P13232 177 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 PGAM2P15259 253 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 OPRK1P41145 380 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 HOXA1P49639 335 aaPredicted RBP7□□□□□ -1.29
LRTM1-201ENST00000273286 FAM219AQ8IW50 185 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 CCDC71LQ8N9Z2 235 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 STXBP6Q8NFX7 210 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 ZFAND1Q8TCF1 268 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 TMEM230Q96A57 120 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 RRNAD1Q96FB5 475 aaKnown RBP7□□□□□ -1.29
LRTM1-201ENST00000273286 SCGB3A2Q96PL1 93 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 RNF126Q9BV68 326 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 SEPSECSQ9HD40 501 aaKnown RBP7□□□□□ -1.29
LRTM1-201ENST00000273286 MCUBQ9NWR8 336 aa7□□□□□ -1.29
LRTM1-201ENST00000273286 IGHV4-28A0A0C4DH34 117 aa6.99□□□□□ -1.29
LRTM1-201ENST00000273286 C3orf85A0A1B0GTC6 90 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms