RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PRB3Q04118 309 aaPredicted RBP13.32□□□□□ -0.28
GPC1-201ENST00000264039 TMEM164Q5U3C3 297 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 AMTNQ6UX39 209 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 ADAMTSL5Q6ZMM2 481 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 ZADH2Q8N4Q0 377 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 RALYQ9UKM9 306 aaKnown RBP13.32□□□□□ -0.28
GPC1-201ENST00000264039 LY96Q9Y6Y9 160 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 ACACAQ13085 2346 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 CKS2P33552 79 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 BMI1P35226 326 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 CHODLQ9H9P2 273 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 BRWD1-AS2P59051 145 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 HSD52Q0P140 79 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 SAA2P0DJI9 122 aaPredicted RBP13.31□□□□□ -0.28
GPC1-201ENST00000264039 Q6ZR03 302 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 J3QW42 95 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 ZNF146Q15072 292 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 C11orf52Q96A22 123 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 HIF1ANQ9NWT6 349 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 TMEM160Q9NX00 188 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 IDI2-AS1Q9NZ38 188 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 EPDR1Q9UM22 224 aa13.31□□□□□ -0.28
GPC1-201ENST00000264039 A0A1B0GUT8 65 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 PATE3B3GLJ2 98 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 VDAC2P45880 294 aaPredicted RBP13.3□□□□□ -0.28
GPC1-201ENST00000264039 CCL13Q99616 98 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 SLC25A10Q9UBX3 287 aaPredicted RBP13.3□□□□□ -0.28
GPC1-201ENST00000264039 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.3□□□□□ -0.28
GPC1-201ENST00000264039 C9orf118A6NHY6 69 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 NPIPB11E5RHQ5 1161 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 PPIFP30405 207 aaKnown RBP13.3□□□□□ -0.28
GPC1-201ENST00000264039 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
GPC1-201ENST00000264039 OR1L8Q8NGR8 309 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 ZNF418Q8TF45 676 aaPredicted RBP13.3□□□□□ -0.28
GPC1-201ENST00000264039 TNFRSF14Q92956 283 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 TTTY12Q9BZ98 90 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 M0R1B8 84 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 IFI27P40305 119 aaPredicted RBP13.3□□□□□ -0.28
GPC1-201ENST00000264039 RAB9AP51151 201 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 B3GALT5-AS1P59052 145 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 KLK15Q9H2R5 256 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 S4R3C0 116 aa13.3□□□□□ -0.28
GPC1-201ENST00000264039 CNIH1O95406 144 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 SRFP11831 508 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 MEOX1P50221 254 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 MBNL2Q5VZF2 373 aaKnown RBP13.29□□□□□ -0.28
GPC1-201ENST00000264039 SH2D6Q7Z4S9 175 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 HIST1H4GQ99525 98 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 SRSF8Q9BRL6 282 aaKnown RBP13.29□□□□□ -0.28
GPC1-201ENST00000264039 NCR2O95944 276 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 IGKV1-16P04430 117 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 PCP2Q8IVA1 136 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 MGST3O14880 152 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 IL11RAQ14626 422 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 TWIST1Q15672 202 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 Q6ZSR3 168 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 FAM214BQ7L5A3 538 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 C17orf82Q86X59 251 aaPredicted RBP13.29□□□□□ -0.28
GPC1-201ENST00000264039 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 CHCHD1Q96BP2 118 aaKnown RBP13.29□□□□□ -0.28
GPC1-201ENST00000264039 MS4A6AQ9H2W1 248 aa13.29□□□□□ -0.28
GPC1-201ENST00000264039 SMKR1H3BMG3 65 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 KIR2DS2P43631 304 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 WDR82Q6UXN9 313 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 RAB9BQ9NP90 201 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 KLRC4-KLRK1H3BQV0 150 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 K7EP34 96 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 SCGB1C2P0DMR2 95 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 RHOGP84095 191 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 RBPJQ06330 500 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 PRELID3AQ96N28 172 aa13.28□□□□□ -0.28
GPC1-201ENST00000264039 TRGV5A0A0B4J1U4 118 aa13.27□□□□□ -0.28
GPC1-201ENST00000264039 ARMS2P0C7Q2 107 aa13.27□□□□□ -0.28
GPC1-201ENST00000264039 COX8AP10176 69 aa13.27□□□□□ -0.28
GPC1-201ENST00000264039 ZNF134P52741 427 aa13.27□□□□□ -0.28
GPC1-201ENST00000264039 C6orf15Q6UXA7 325 aaPredicted RBP13.27□□□□□ -0.28
GPC1-201ENST00000264039 KBTBD11-OT1A0A1B0GTJ5 212 aa13.27□□□□□ -0.29
GPC1-201ENST00000264039 ORM1P02763 201 aa13.27□□□□□ -0.29
GPC1-201ENST00000264039 CFHR2P36980 270 aa13.27□□□□□ -0.29
GPC1-201ENST00000264039 Q9H3A6 140 aa13.27□□□□□ -0.29
GPC1-201ENST00000264039 JPT1Q9UK76 154 aa13.27□□□□□ -0.29
GPC1-201ENST00000264039 SAA1P0DJI8 122 aaPredicted RBP13.26□□□□□ -0.29
GPC1-201ENST00000264039 ZNF766Q5HY98 468 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 GTSCR1Q86UQ5 136 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 OR5A1Q8NGJ0 315 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 C1RLQ9NZP8 487 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 DLL1O00548 723 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 CEACAM3P40198 252 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 SSBP2P81877 361 aaPredicted RBP13.26□□□□□ -0.29
GPC1-201ENST00000264039 CD69Q07108 199 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 IGKV1OR2-108A0A075B7D4 117 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 D6R8Y8 96 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 CD177Q8N6Q3 437 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 ARPC1AQ92747 370 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 COL6A6A6NMZ7 2263 aa13.26□□□□□ -0.29
GPC1-201ENST00000264039 H3BMG7 143 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 SCGB1D4Q6XE38 83 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 WDR31Q8NA23 367 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms