RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 RITA1Q96K30 269 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 NAGKQ9UJ70 344 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 USP9XQ93008 2570 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 DNAJC9-AS1A6NH13 148 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 J3KRW8 73 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 SAP30O75446 220 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 SFTA3P0C7M3 94 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 GSX1Q9H4S2 264 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 TMEM50AO95807 157 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 UTF1Q5T230 341 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 MIR17HGQ75NE6 70 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 TUBA4BQ9H853 241 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 WFDC1Q9HC57 220 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 TMA7Q9Y2S6 64 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 IGLC7A0M8Q6 106 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 OR4C46A6NHA9 309 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 LINC01619G3V211 115 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 PROP1O75360 226 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 IGLV2-14P01704 120 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 S100A9P06702 114 aaKnown RBP6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 LYL1P12980 280 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 TSPOP30536 169 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 SMDT1Q9H4I9 107 aa6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 ZNF331Q9NQX6 463 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-201ENST00000263956 SONP18583 2426 aaKnown RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 CGB1A6NKQ9 187 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 PPP1R2P9O14990 202 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 GATCO43716 136 aaKnown RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 TOMM40O96008 361 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 CD33P20138 364 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 SYNJ2BPP57105 145 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 MEF2BQ02080 365 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 ZNF90Q03938 601 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 HABP2Q14520 560 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 ICAM4Q14773 271 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 DYNAPQ8N1N2 210 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 SLC50A1Q9BRV3 221 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 IGHG2P01859 326 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 FOXE3Q13461 319 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 TMEM95Q3KNT9 176 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 FAM74A3Q4VXF1 159 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 LDLRAD2Q5SZI1 272 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 PRNTQ86SH4 94 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 GPR61Q9BZJ8 451 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 BPTFQ12830 3046 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 USP24Q9UPU5 2620 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 XIRP2A4UGR9 3374 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 MFSD2BA6NFX1 497 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 LY6LH3BQJ8 138 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 FHITP49789 147 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 PAX9P55771 341 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 CMC4P56277 68 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 YPEL3P61236 119 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 NUTF2P61970 127 aaKnown RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 TCF24Q7RTU0 167 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 MGST2Q99735 147 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 HSPB9Q9BQS6 159 aa6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 TSSC4Q9Y5U2 329 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-201ENST00000263956 ZNF705GA8MUZ8 300 aaPredicted RBP6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 IGLV2-23P01705 113 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 HIST1H1AQ02539 215 aaPredicted RBP6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 DAZ1Q9NQZ3 744 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 ORM1P02763 201 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 HSPB1P04792 205 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 NMBP08949 121 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 HTN1P15515 57 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 C11orf42Q8N5U0 333 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 CFHR4Q92496 578 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 SMCO4Q9NRQ5 59 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 NAT8Q9UHE5 227 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 CLPSL1A2RUU4 121 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 RGS13O14921 159 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 S100A8P05109 93 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 LEMD1Q68G75 181 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 CIARTQ8N365 385 aaPredicted RBP6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 C5orf17Q8NAS9 161 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 TLN2Q9Y4G6 2542 aa6.54□□□□□ -1.36
GTF3C3-201ENST00000263956 PPP5D1E7EU14 171 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 SIGLEC15Q6ZMC9 328 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 C19orf35Q6ZS72 473 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 OR11H1Q8NG94 326 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 ABCA12Q86UK0 2595 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 SMIM17P0DL12 118 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 EBI3Q14213 229 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 RHPN1-AS1Q9BWJ2 59 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 SLC25A39Q9BZJ4 359 aaPredicted RBP6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 POLQO75417 2590 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 ZNF98A6NK75 572 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 CHEK1O14757 476 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 NDUFB4O95168 129 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 BSXQ3C1V8 233 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 AJUBAQ96IF1 538 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 FAM210AQ96ND0 272 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 P01737 135 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 CRYBB3P26998 211 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 S100A2P29034 98 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms