RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 DNAL4O96015 105 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 SNRPD3P62318 126 aaKnown RBP16.07■□□□□ 0.16
FAM20B-201ENST00000263733 NUP35Q8NFH5 326 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 SLX1AQ9BQ83 275 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 ABCA1O95477 2261 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 IGHV1-18A0A0C4DH31 117 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 LOXL4Q96JB6 756 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 POLR3KQ9Y2Y1 108 aaPredicted RBP16.07■□□□□ 0.16
FAM20B-201ENST00000263733 XIRP1Q702N8 1843 aaKnown RBP16.07■□□□□ 0.16
FAM20B-201ENST00000263733 IGHV3-11P01762 117 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 RAX2Q96IS3 184 aa16.07■□□□□ 0.16
FAM20B-201ENST00000263733 FAM90A9PA6NNJ1 464 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 ATP5L2Q7Z4Y8 100 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 SIGMAR1Q99720 223 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 CDKN1AP38936 164 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 GUSBP1Q15486 140 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 ZNF479Q96JC4 524 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 PMS2P5A8MQ11 134 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 SEC11AP67812 179 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 GTSCR1Q86UQ5 136 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 OR5A1Q8NGJ0 315 aa16.06■□□□□ 0.16
FAM20B-201ENST00000263733 IGHV4-39P01824 125 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 IGKCP01834 107 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 TNFRSF18Q9Y5U5 241 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 D6R8Y8 96 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 TMEM42Q69YG0 159 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 DEFB104AQ8WTQ1 72 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 C15orf62A8K5M9 175 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 WISP1O95388 367 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 IGHV2-70P01814 119 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 HSD52Q0P140 79 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 TMEM95Q3KNT9 176 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 IGKV3D-20A0A0C4DH25 116 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 NBR2O15453 112 aa16.05■□□□□ 0.16
FAM20B-201ENST00000263733 SIP14410 1827 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 MLANAQ16655 118 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 TPTE2P1Q5T6R2 138 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 CD177Q8N6Q3 437 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 C8orf46Q8TAG6 207 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 LINC00479Q96M42 142 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 SCRT1Q9BWW7 348 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 TMEM133Q9H2Q1 129 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 MOB4Q9Y3A3 225 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 PDLIM4P50479 330 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 DIDO1Q9BTC0 2240 aaKnown RBP16.04■□□□□ 0.16
FAM20B-201ENST00000263733 HOXA3O43365 443 aaPredicted RBP16.04■□□□□ 0.16
FAM20B-201ENST00000263733 SNHG12Q9BXW3 62 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 NCOR1O75376 2440 aa16.04■□□□□ 0.16
FAM20B-201ENST00000263733 IGKV2-40A0A087WW87 121 aaPredicted RBP16.03■□□□□ 0.16
FAM20B-201ENST00000263733 IGKV2D-40P01614 121 aaPredicted RBP16.03■□□□□ 0.16
FAM20B-201ENST00000263733 PSG1P11464 419 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 MS4A6AQ9H2W1 248 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 SCN5AQ14524 2016 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 TRAV8-1A0A0A6YYK1 113 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 MLNRO43193 412 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 UBE2V1Q13404 147 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 DOCK9Q9BZ29 2069 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 MYLKQ15746 1914 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 A0A0G2JLM5 398 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 NXT2Q9NPJ8 142 aaKnown RBP16.03■□□□□ 0.16
FAM20B-201ENST00000263733 SRSF1Q07955 248 aaKnown RBP eCLIP16.03■□□□□ 0.16
FAM20B-201ENST00000263733 PVRIGQ6DKI7 326 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 ASCL2Q99929 193 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 PSMG4Q5JS54 123 aa16.03■□□□□ 0.16
FAM20B-201ENST00000263733 Q6P435 159 aa16.02■□□□□ 0.16
FAM20B-201ENST00000263733 LTBP1Q14766 1721 aa16.02■□□□□ 0.16
FAM20B-201ENST00000263733 ZNF815PA8K554 130 aa16.02■□□□□ 0.15
FAM20B-201ENST00000263733 INTS1Q8N201 2190 aaKnown RBP16.02■□□□□ 0.15
FAM20B-201ENST00000263733 TRAV12-3A0A0B4J271 114 aa16.02■□□□□ 0.15
FAM20B-201ENST00000263733 GFRA3O60609 400 aa16.02■□□□□ 0.15
FAM20B-201ENST00000263733 BCL6BQ8N143 479 aaPredicted RBP16.02■□□□□ 0.15
FAM20B-201ENST00000263733 PFN1P07737 140 aaKnown RBP16.01■□□□□ 0.15
FAM20B-201ENST00000263733 SRRM5B3KS81 715 aa16.01■□□□□ 0.15
FAM20B-201ENST00000263733 IL18BPO95998 194 aa16.01■□□□□ 0.15
FAM20B-201ENST00000263733 CD300EQ496F6 205 aaPredicted RBP16.01■□□□□ 0.15
FAM20B-201ENST00000263733 COPS9Q8WXC6 57 aa16.01■□□□□ 0.15
FAM20B-201ENST00000263733 IGKV1-6A0A0C4DH72 117 aa16.01■□□□□ 0.15
FAM20B-201ENST00000263733 RPUSD1Q9UJJ7 312 aaKnown RBP16.01■□□□□ 0.15
FAM20B-201ENST00000263733 IGHV1-46P01743 117 aa16.01■□□□□ 0.15
FAM20B-201ENST00000263733 WFDC12Q8WWY7 111 aa16.01■□□□□ 0.15
FAM20B-201ENST00000263733 CHTOPQ9Y3Y2 248 aaKnown RBP16.01■□□□□ 0.15
FAM20B-201ENST00000263733 SYS1-DBNDD2H3BUS1 97 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 TRAV2A0A0B4J234 112 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 ERVK11-1P61568 191 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 LYZL1Q6UWQ5 148 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 LIME1Q9H400 295 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 DOCK10Q96BY6 2186 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 IGHV3-64A0A075B6Q5 118 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 TIMM23O14925 209 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 TCRAP04437 139 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 ATP5J2P56134 94 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 CD7P09564 240 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 GAGE13Q4V321 117 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 TOMM7Q9P0U1 55 aa16■□□□□ 0.15
FAM20B-201ENST00000263733 IGHV2-5P01817 119 aa15.99■□□□□ 0.15
FAM20B-201ENST00000263733 SLC25A48Q6ZT89 311 aaKnown RBP15.99■□□□□ 0.15
FAM20B-201ENST00000263733 PIMREGQ9BSJ6 248 aa15.99■□□□□ 0.15
FAM20B-201ENST00000263733 ZNF524Q96C55 264 aa15.99■□□□□ 0.15
FAM20B-201ENST00000263733 PPBPP02775 128 aa15.99■□□□□ 0.15
FAM20B-201ENST00000263733 WNK2Q9Y3S1 2297 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms