RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 M0R2Z0 102 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 ITGB1BP1O14713 200 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 MT-ND6P03923 174 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 GATA4P43694 442 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 HNRNPA3P51991 378 aaKnown RBP13.28□□□□□ -0.28
ZNF541-201ENST00000263351 TBR1Q16650 682 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 HSBP1O75506 76 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 IGLV2-23P01705 113 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
ZNF541-201ENST00000263351 MRGPRG-AS1Q2M3A8 158 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 PNKDQ8N490 385 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 C7orf69Q9H7B7 122 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 CTSZQ9UBR2 303 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 FAM181BA6NEQ2 426 aa13.27□□□□□ -0.28
ZNF541-201ENST00000263351 M0QZK8 103 aa13.27□□□□□ -0.28
ZNF541-201ENST00000263351 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.28
ZNF541-201ENST00000263351 RBMXL3Q8N7X1 1067 aaKnown RBP13.27□□□□□ -0.28
ZNF541-201ENST00000263351 GTSF1Q8WW33 167 aa13.27□□□□□ -0.28
ZNF541-201ENST00000263351 BORCS7Q96B45 105 aa13.27□□□□□ -0.28
ZNF541-201ENST00000263351 PGLYRP4Q96LB8 373 aa13.27□□□□□ -0.28
ZNF541-201ENST00000263351 PMCHL2Q9BQD1 86 aa13.27□□□□□ -0.28
ZNF541-201ENST00000263351 LAMTOR2Q9Y2Q5 125 aa13.27□□□□□ -0.28
ZNF541-201ENST00000263351 hADV38S2A0JD32 116 aa13.27□□□□□ -0.29
ZNF541-201ENST00000263351 IGLL1P15814 213 aa13.27□□□□□ -0.29
ZNF541-201ENST00000263351 OR8B2Q96RD0 313 aa13.27□□□□□ -0.29
ZNF541-201ENST00000263351 ALKBH7Q9BT30 221 aaPredicted RBP13.27□□□□□ -0.29
ZNF541-201ENST00000263351 APOA2P02652 100 aa13.27□□□□□ -0.29
ZNF541-201ENST00000263351 OR5AN1Q8NGI8 311 aa13.27□□□□□ -0.29
ZNF541-201ENST00000263351 ZNF714Q96N38 554 aa13.27□□□□□ -0.29
ZNF541-201ENST00000263351 CELSR1Q9NYQ6 3014 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 TCRBV4S1A1TA0A5B7 111 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 A0A1W2PRD5 423 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 A0A1W2PRF3 423 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 A0A1W2PRM7 423 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 FNDC10F2Z333 226 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 LYNX1G3V0Z9 82 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 LYNX1P0DP58 116 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 FOXE3Q13461 319 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 COL5A1-AS1Q5SY13 56 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 LINC00312Q9Y6C7 94 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 S4R3C0 116 aa13.26□□□□□ -0.29
ZNF541-201ENST00000263351 ADIPOQQ15848 244 aa13.25□□□□□ -0.29
ZNF541-201ENST00000263351 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
ZNF541-201ENST00000263351 UQCR10Q9UDW1 63 aa13.25□□□□□ -0.29
ZNF541-201ENST00000263351 COL12A1Q99715 3063 aa13.25□□□□□ -0.29
ZNF541-201ENST00000263351 hDV102S1A0JD36 115 aa13.25□□□□□ -0.29
ZNF541-201ENST00000263351 C2orf70A6NJV1 201 aa13.25□□□□□ -0.29
ZNF541-201ENST00000263351 TSPOP30536 169 aa13.25□□□□□ -0.29
ZNF541-201ENST00000263351 RPL19P84098 196 aaKnown RBP13.25□□□□□ -0.29
ZNF541-201ENST00000263351 EXOC3-AS1Q8N2X6 119 aa13.25□□□□□ -0.29
ZNF541-201ENST00000263351 OSR1Q8TAX0 266 aaPredicted RBP13.25□□□□□ -0.29
ZNF541-201ENST00000263351 WNK2Q9Y3S1 2297 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 CCL25O15444 150 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 SELENOVP59797 346 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 UBE2G1P62253 170 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 SSX8Q7RTT4 187 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 ARL2-SNX15V9GYD0 113 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 BSPH1Q075Z2 132 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 PRSS33Q8NF86 280 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 GRAMD2BQ96HH9 432 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 MRPL32Q9BYC8 188 aaKnown RBP13.24□□□□□ -0.29
ZNF541-201ENST00000263351 LINC00574Q9H8X3 128 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 EPDR1Q9UM22 224 aa13.24□□□□□ -0.29
ZNF541-201ENST00000263351 CSN3P07498 182 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 TCTAP57738 103 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 TMEM177Q53S58 311 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 FAM120AOSQ5T036 256 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 PDPNQ86YL7 162 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 ZADH2Q8N4Q0 377 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 ZC2HC1AQ96GY0 325 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 C17orf77Q96MU5 243 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 ZNF835Q9Y2P0 537 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 MYCNOSP40205 109 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 C1orf185Q5T7R7 199 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 TEX36Q5VZQ5 186 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 FAM169BQ8N8A8 192 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 OR4C13Q8NGP0 309 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 TMEM167AQ8TBQ9 72 aa13.23□□□□□ -0.29
ZNF541-201ENST00000263351 HRNRQ86YZ3 2850 aaPredicted RBP13.22□□□□□ -0.29
ZNF541-201ENST00000263351 IGLC7A0M8Q6 106 aa13.22□□□□□ -0.29
ZNF541-201ENST00000263351 TM4SF5O14894 197 aa13.22□□□□□ -0.29
ZNF541-201ENST00000263351 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
ZNF541-201ENST00000263351 SELENOKQ9Y6D0 94 aa13.22□□□□□ -0.29
ZNF541-201ENST00000263351 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
ZNF541-201ENST00000263351 TNFSF4P23510 183 aa13.22□□□□□ -0.29
ZNF541-201ENST00000263351 CACNG8Q8WXS5 425 aa13.22□□□□□ -0.29
ZNF541-201ENST00000263351 AKAP6Q13023 2319 aa13.21□□□□□ -0.29
ZNF541-201ENST00000263351 C17orf100A8MU93 164 aa13.21□□□□□ -0.29
ZNF541-201ENST00000263351 CA7P43166 264 aa13.21□□□□□ -0.29
ZNF541-201ENST00000263351 BCL6BQ8N143 479 aaPredicted RBP13.21□□□□□ -0.29
ZNF541-201ENST00000263351 GAL3ST2Q9H3Q3 398 aa13.21□□□□□ -0.29
ZNF541-201ENST00000263351 NKX6-3A6NJ46 265 aa13.21□□□□□ -0.3
ZNF541-201ENST00000263351 OR8B3Q8NGG8 313 aa13.21□□□□□ -0.3
ZNF541-201ENST00000263351 LOXL4Q96JB6 756 aa13.21□□□□□ -0.3
ZNF541-201ENST00000263351 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.3
ZNF541-201ENST00000263351 ATRXP46100 2492 aa13.21□□□□□ -0.3
ZNF541-201ENST00000263351 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 A0A1B0GXF2 115 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 THBDP07204 575 aa13.2□□□□□ -0.3
ZNF541-201ENST00000263351 LOXP28300 417 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms