RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 Q9HAA7 133 aa12.25□□□□□ -0.45
CCDC6-201ENST00000263102 MRPS18CQ9Y3D5 142 aaKnown RBP12.25□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE2EQ4V326 116 aa12.25□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE2DQ9UEU5 116 aa12.25□□□□□ -0.45
CCDC6-201ENST00000263102 ERG28Q9UKR5 140 aa12.25□□□□□ -0.45
CCDC6-201ENST00000263102 LINC00587B1AMM8 73 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 H3BMM0 161 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 ZNF660Q6AZW8 331 aaPredicted RBP12.24□□□□□ -0.45
CCDC6-201ENST00000263102 ZNF497Q6ZNH5 498 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
CCDC6-201ENST00000263102 UBE2WQ96B02 151 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 FNDC4Q9H6D8 234 aaPredicted RBP12.24□□□□□ -0.45
CCDC6-201ENST00000263102 KLK9Q9UKQ9 250 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 SMCHD1A6NHR9 2005 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 RPUSD1Q9UJJ7 312 aaKnown RBP12.24□□□□□ -0.45
CCDC6-201ENST00000263102 QSER1Q2KHR3 1735 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 DKK1O94907 266 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
CCDC6-201ENST00000263102 IGKV2D-24A0A075B6R9 120 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 VWC2Q2TAL6 325 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 FAM223BA6NKX1 122 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 ESDP10768 282 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 FAM223AQ8IWN6 122 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 MESP1Q9BRJ9 268 aa12.24□□□□□ -0.45
CCDC6-201ENST00000263102 TDRD6O60522 2096 aaKnown RBP12.23□□□□□ -0.45
CCDC6-201ENST00000263102 LINC01590Q5TEZ4 76 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 RASL11AQ6T310 242 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 USMG5Q96IX5 58 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 CSTL1Q9H114 145 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 TRIP12Q14669 1992 aaPredicted RBP12.23□□□□□ -0.45
CCDC6-201ENST00000263102 IL18BPO95998 194 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 PFN2P35080 140 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 DERL1Q9BUN8 251 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 NABP1Q96AH0 204 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 SPXQ9BT56 116 aa12.23□□□□□ -0.45
CCDC6-201ENST00000263102 F2Z2F3 143 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 FGFBP3Q8TAT2 258 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 NEUROG3Q9Y4Z2 214 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 ZFP36L1Q07352 338 aaKnown RBP12.22□□□□□ -0.45
CCDC6-201ENST00000263102 PRIMA1Q86XR5 153 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 IGF2BP2-AS1Q96M15 143 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 A0A1B0GV90 55 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 A6NNC1 897 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 NXPH4O95158 308 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 AZU1P20160 251 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE6Q13070 117 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 LYPD2Q6UXB3 125 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 TNFRSF14Q92956 283 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 TM2D1Q9BX74 207 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 IGKV1D-13A0A0B4J2D9 117 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 A0A0J9YY99 117 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 TMEM238C9JI98 176 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 IGKV1-13P0DP09 117 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 MST1LQ2TV78 715 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 MYO16Q9Y6X6 1858 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 TAL2Q16559 108 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 GSN-AS1Q9NRJ2 163 aa12.22□□□□□ -0.45
CCDC6-201ENST00000263102 ZNF646O15015 1829 aaPredicted RBP12.22□□□□□ -0.45
CCDC6-201ENST00000263102 EFNA2O43921 213 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 KLF5Q13887 457 aaPredicted RBP12.21□□□□□ -0.45
CCDC6-201ENST00000263102 CLPSL1A2RUU4 121 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 BUB1B-PAK6H3BSN5 160 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 M0R1W7 72 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 AKAP11Q9UKA4 1901 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 NHSL1Q5SYE7 1610 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 PRB1P04280 392 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 PRTN3P24158 256 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.45
CCDC6-201ENST00000263102 H2BFSP57053 126 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 PMVKQ15126 192 aa12.21□□□□□ -0.45
CCDC6-201ENST00000263102 TRAV8-3A0A0A6YYJ7 113 aa12.21□□□□□ -0.46
CCDC6-201ENST00000263102 GGTLC1Q9BX51 225 aa12.21□□□□□ -0.46
CCDC6-201ENST00000263102 ZNF138P52744 262 aa12.21□□□□□ -0.46
CCDC6-201ENST00000263102 PLSCR4Q9NRQ2 329 aa12.21□□□□□ -0.46
CCDC6-201ENST00000263102 ADMP35318 185 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 SPINK13Q1W4C9 94 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 C5orf64Q2M2E5 130 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 MTURNQ8N3F0 131 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 A8MXK9 166 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 DMRT1Q9Y5R6 373 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 DMRTC2Q8IXT2 367 aaPredicted RBP12.2□□□□□ -0.46
CCDC6-201ENST00000263102 DAZ1Q9NQZ3 744 aaKnown RBP12.2□□□□□ -0.46
CCDC6-201ENST00000263102 RREB1Q92766 1687 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 IGHV3-38A0A0C4DH36 116 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 DDTP30046 118 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 LYZL4Q96KX0 146 aa12.2□□□□□ -0.46
CCDC6-201ENST00000263102 TRBV25-1A0A075B6N4 114 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 TRBV6-7A0A0A0MS04 114 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 GAGE2AQ6NT46 116 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 C9orf139Q6ZV77 190 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 VWCEQ96DN2 955 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 CLDN16Q9Y5I7 305 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 ICE1Q9Y2F5 2266 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 TRPM3Q9HCF6 1732 aaPredicted RBP12.19□□□□□ -0.46
CCDC6-201ENST00000263102 NDUFS8O00217 210 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 SH2D1AO60880 128 aa12.19□□□□□ -0.46
CCDC6-201ENST00000263102 DUTP33316 252 aaKnown RBP12.19□□□□□ -0.46
CCDC6-201ENST00000263102 RPL23P62829 140 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms